KEGG   Rathayibacter iranicus: C7V51_04260
Entry
C7V51_04260       CDS       T05878                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ria  Rathayibacter iranicus
Pathway
ria03030  DNA replication
ria03430  Mismatch repair
ria03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ria00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C7V51_04260
   03430 Mismatch repair
    C7V51_04260
   03440 Homologous recombination
    C7V51_04260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ria03032]
    C7V51_04260
   03400 DNA repair and recombination proteins [BR:ria03400]
    C7V51_04260
Enzymes [BR:ria01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C7V51_04260
DNA replication proteins [BR:ria03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C7V51_04260
DNA repair and recombination proteins [BR:ria03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C7V51_04260
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AZZ55188
UniProt: A0AAD2JG60
LinkDB
Position
complement(915506..916294)
AA seq 262 aa
MSTTAQTEPTLFDDGEFGSDAEFERPDERAPAAGAHWFDLLAVFDLETTGIDVRTSRIVT
AYVGVLDAAGQPIEGTTWLADPGIEIPPGASAVHGITTDYAHEHGRPPGEVVAEISESLR
SLLARGVPVVVYNAPYDLSLLAHEARRWGVPVLLDPSPVIDPLVIDKAVDRFRKGKRTLT
VAAEHYGVALTEAHDAGADAIAAGRVAQAIGRAFANELGVDAEALHELQVDWCSTQAASF
QEYMRRVRDESFVADGTWPVRH
NT seq 789 nt   +upstreamnt  +downstreamnt
gtgagcaccaccgcacagaccgagcccaccctgttcgacgatggcgagttcggcagtgat
gccgagttcgagaggccggacgaacgtgccccggctgcgggagcgcactggttcgatctc
ctcgcggtgttcgacctcgagacgacgggcatcgacgtgcgtacgagtcgcattgtcacg
gcatatgtcggcgtcctcgacgcagcgggccagcccatcgagggaacgacctggctggcc
gaccccggaatcgagattccccccggtgcgagcgccgtgcacggcatcaccaccgactac
gcgcacgagcacggacgccctcccggcgaggtcgtcgccgagatctcggagtcgctgcgc
tcgctcctcgcgcgcggcgtcccggtcgtcgtgtacaacgcaccctacgacctctcgctt
ctggcgcatgaagcgcgtcgctggggcgtcccggtcttgctcgacccgagcccggtcatt
gatccgctcgtcatcgacaaggcggtcgaccgctttcgcaagggcaagcgcactctcacc
gtcgctgccgagcattacggagtcgcccttaccgaggcccacgatgccggagccgacgcg
atcgccgccggtcgggtcgctcaggccatcggccgcgcgttcgccaacgaacttggcgtc
gacgccgaggccctccacgagctgcaggtcgactggtgtagcacgcaggccgcatcattc
caggagtacatgcgccgcgtacgcgacgagtcctttgtcgctgatggcacgtggcccgtc
cgccactaa

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