Rathayibacter iranicus: C7V51_04525
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Entry
C7V51_04525 CDS
T05878
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ria
Rathayibacter iranicus
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ria03016
]
C7V51_04525
Enzymes [BR:
ria01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C7V51_04525
Transfer RNA biogenesis [BR:
ria03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C7V51_04525
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZZ55236
UniProt:
A0AAD1ABH9
LinkDB
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Position
975609..976808
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AA seq
399 aa
AA seq
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MTDYRVLSTPDEFLAAVDALAAGEGPVAVDAERASGFTYSQRAYLIQVYRRGAGAFLLDP
PAIGRMDALQAVIGEEEWVLHAASQDLACLREVGLDPVRIFDTELAARLLGLPRVGLGAV
VEDLLGVHLAKEHSAADWSTRPLPQSWLVYAAKDVELLIDLRDRMEELLVAARKTRIVRE
EFEATLARAPKVIPPDPWRRLAGVHSLRGQRPLAVARELWLARDAFARERDIAPGRLIPD
ASIIAVARNIPTSVGQLSGRRDFTGRASRGEVERWWAAIERGVATEELPNPTRPAVDTLP
PPRAWGDRNPAADARLKAGRAVVTEIAELLTMPVENLLTPELLRRLAWNPPEPLDATTVA
EELARAGARPWQIEATSGSIATAFVEAAQAPAEGTESPS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattaccgagtcctctccacacccgacgagttcctcgccgcggtcgacgccctc
gccgccggcgagggtccggttgctgtcgacgccgagcgcgcttccggcttcacctactcg
cagcgcgcgtacctgatccaggtctatcggcgtggtgccggcgcgttcctccttgacccg
cccgccatcggccggatggatgcgcttcaggcggtcatcggcgaggaggagtgggttcta
cacgccgcgagtcaggaccttgcgtgcctgcgcgaggtcggcctcgatcccgtccgcatc
ttcgacaccgagctcgcggcgcggctcctgggcctgcctcgggtgggtctcggcgccgtc
gtcgaagatctgctgggcgtccacctcgcgaaagaacactcggcggccgactggtccacc
cggccgctcccccagagctggctcgtctatgccgcgaaggacgtcgaactcctgatcgac
ctgcgtgatcggatggaggagctgcttgtcgcggcccggaagacccggatcgtgcgcgag
gagttcgaggcgaccctggctcgcgcgccgaaggtcatcccgcccgatccctggcgacgc
ctcgccggagtgcattccctccgcggccagcggcccctcgccgtggcgcgagaactctgg
ctggctcgcgacgcctttgcccgcgagcgtgacatcgcgcccggccgactcatcccggat
gcctcgatcatcgccgtcgctcgcaatatccccaccagcgtggggcaactctcgggtcgg
cgcgactttaccggtcgagccagtcgcggcgaggtagagcgctggtgggcagcgatcgaa
cggggtgtcgcgacggaggagctgcccaaccccactcggcccgccgtcgacaccctcccc
ccgccgcgcgcgtggggcgaccgcaacccggctgctgacgcccggctcaaggccggtcgc
gccgtcgtgaccgagattgctgaacttctgacgatgcccgtggagaatctgctgacgccg
gagctactgcgccgcctggcgtggaacccgcccgagccgctcgacgcgacgacggtcgcc
gaggagcttgcccgcgccggagccagaccctggcagatcgaagcgacgtccggctcgatt
gcgaccgcatttgtcgaagccgcccaagcgccggccgagggcaccgaaagcccttcgtag
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