Rathayibacter iranicus: C7V51_04590
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Entry
C7V51_04590 CDS
T05878
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ria
Rathayibacter iranicus
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ria03032
]
C7V51_04590
03400 DNA repair and recombination proteins [BR:
ria03400
]
C7V51_04590
Enzymes [BR:
ria01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C7V51_04590
DNA replication proteins [BR:
ria03032
]
Prokaryotic type
DNA Topoisomerases
C7V51_04590
DNA repair and recombination proteins [BR:
ria03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7V51_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AZZ55247
UniProt:
A0AAD1ABM1
LinkDB
All DBs
Position
complement(993349..995430)
Genome browser
AA seq
693 aa
AA seq
DB search
MASTDYNARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCVWEVIDNSVDEALAGHGTEIS
VLLHADGSVEVRDRARGIPVDIEPKTGLSGVEVVFTKLHAGGKFGSGSYAASGGLHGVGA
SVVNALSERLDVEVDRNGRTYQMSFHRGEPGRFADAGEPTPDAPFTPFENGSELTVIGKV
AKGVTGTRVRYWADRQIFTKGASFQTDELVTRARQTAFLVPGLTIDIVDDRAEERRAEMF
RYDGGISEFVEFLAPDAPVTDILRLTGSGTFTETVPVLTSGGAMVPTEVERTCEVDIALR
WGTGYETVVRSFVNIISTPKGGTHQTGFEQGLLKLLRSQVEANARRLKVGSDKLEKDDVL
AGLTAVLTVRLPEPQFEGQTKEILGTPAVRAIVASTLASTLGAVFSSTRREDKTQTSQLL
EKVVAEMKSRISARAHKETQRRKNALESSSLPAKLVDCRSNDVENSELFIVEGDSALGTA
KLARNSEYQALLPIRGKILNTQKASIADMLSNAECASMIQVIGAGSGRSFDLPAARYGKI
ILMSDADVDGAHIRTLLLTLFFRYMRPLVEAGRVFAAVPPLHRLVVMNAGKKPNETIYTY
SEKELQSVLAALGKAGRRYQDPIQRYKGLGEMDADQLATTTMDRARRTLRRVRVADAENA
GRVFELLMGNDVAPRKEFIVRGSESLSRDRIDV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaccgactacaacgcccggcatctctcggtcctcgaaggtctcgaagcggtc
cgcaagcggccggggatgtacatcggctcgaccgattcgcgcgggctgatgcactgtgtg
tgggaggtgatcgataactccgtcgatgaagccctggcggggcacggcaccgagatcagc
gttctgctgcacgccgacgggagcgtcgaggtccgcgaccgagcgcgcggaatccccgtc
gacatcgaacccaagaccggactctccggggtggaggtcgtcttcacgaagctgcacgcg
ggggggaagtttggctccggctcgtacgctgcgtccggcggcctgcacggcgtcggcgcc
tcggtcgtcaacgcgctctcggagcggctcgacgtcgaagtcgaccgcaacggccgtacg
taccagatgtccttccaccgcggcgagccgggccgcttcgccgacgctggcgagcccact
ccggacgcgccgttcacgccgttcgagaacggctccgaactcaccgtcatcggaaaagtc
gcgaagggcgtgacaggaacccgcgtgcgttattgggccgaccgccaaattttcacgaaa
ggcgcgtcattccagacggacgagctcgttactcgggcgcggcagacagcgtttctcgtc
cccggtctcacgatcgacattgtcgatgaccgggcggaggagcgccgcgcggagatgttc
cgttacgacggtggcatctcggaattcgtcgagttcctcgcccctgacgcgccggtgacc
gacatcctgcgcctcacgggctcgggtaccttcaccgagacggtccccgtgctcacctcg
ggcggtgcgatggtgccgactgaggtcgagcgcacctgcgaggtcgacatcgccctgcgc
tggggaaccggctacgagactgtcgtgcgcagcttcgtgaacatcatctcgacacccaag
ggagggacgcatcagaccgggttcgaacagggcctgctcaagttgctccgctcacaggtc
gaggcgaacgctcggcgcctcaaggtcggctcggacaagctggaaaaggatgacgtgctc
gcggggctcaccgcggtgctgaccgtgcgactccctgagccgcagttcgagggccagacc
aaagagattctcggcacgccggcggtgcgcgcgatcgtcgcgagcacactcgcctcgacg
ctgggcgcggtcttctcctcgacccgccgagaagataagacgcagacgtcgcagctgctc
gagaaggtcgtcgccgaaatgaagtcgcgcatttcggcgcgcgcacacaaggagacgcag
cgccggaagaatgcgctggaatcgtcgtcgctgccggcgaaactcgtggattgtcgtagc
aacgacgtggagaacagcgagcttttcatcgtcgagggcgattccgctctcggcaccgcg
aagctcgcccgcaacagcgaataccaggcgctgctgcccatccgcgggaagatcctcaac
actcaaaaggccagcatcgccgacatgctctcgaacgccgagtgcgcgtcgatgatccag
gtgatcggcgcgggctccggccgctcgttcgatcttccggcggcccgatacgggaagatc
atcctgatgagcgacgccgacgtcgatggcgcgcatattcgcaccctgctgcttactctg
ttctttcgctacatgcgcccgctggtcgaggcgggccgagtcttcgctgccgttccgcca
ctgcacaggcttgtcgtcatgaacgccggtaagaagccgaacgagacgatctacacatac
tccgagaaggagctgcagagcgtcctcgctgcgctgggtaaagcgggccggcgctaccag
gacccgattcagcgctacaaaggcctgggtgagatggacgcggaccagctggcgacgacc
acgatggaccgggcccgacgcacgctccgtcgagtccgcgtggccgatgccgaaaatgcg
ggacgggtcttcgagctgctgatgggtaacgacgtcgccccgcgcaaggagttcattgtg
cgcggttcggagtcgctctcgcgggatcgcatcgacgtctga
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