KEGG   Rathayibacter iranicus: C7V51_04630
Entry
C7V51_04630       CDS       T05878                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ria  Rathayibacter iranicus
Pathway
ria00010  Glycolysis / Gluconeogenesis
ria00020  Citrate cycle (TCA cycle)
ria00260  Glycine, serine and threonine metabolism
ria00280  Valine, leucine and isoleucine degradation
ria00310  Lysine degradation
ria00380  Tryptophan metabolism
ria00620  Pyruvate metabolism
ria00630  Glyoxylate and dicarboxylate metabolism
ria00640  Propanoate metabolism
ria00670  One carbon pool by folate
ria00785  Lipoic acid metabolism
ria01100  Metabolic pathways
ria01110  Biosynthesis of secondary metabolites
ria01120  Microbial metabolism in diverse environments
ria01200  Carbon metabolism
ria01210  2-Oxocarboxylic acid metabolism
ria01240  Biosynthesis of cofactors
Module
ria_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ria_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ria_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ria_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ria00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C7V51_04630 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C7V51_04630 (lpdA)
   00620 Pyruvate metabolism
    C7V51_04630 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C7V51_04630 (lpdA)
   00640 Propanoate metabolism
    C7V51_04630 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C7V51_04630 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C7V51_04630 (lpdA)
   00310 Lysine degradation
    C7V51_04630 (lpdA)
   00380 Tryptophan metabolism
    C7V51_04630 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C7V51_04630 (lpdA)
   00670 One carbon pool by folate
    C7V51_04630 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ria04147]
    C7V51_04630 (lpdA)
Enzymes [BR:ria01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C7V51_04630 (lpdA)
Exosome [BR:ria04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C7V51_04630 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 AlaDh_PNT_C HI0933_like FAD_oxidored GIDA DAO 3HCDH_N FAD_binding_2 NAD_binding_8 2-Hacid_dh_C Amino_oxidase
Other DBs
NCBI-ProteinID: AZZ55255
UniProt: A0AAD1ADB1
LinkDB
Position
1003502..1004875
AA seq 457 aa
MSEERYDLVVLGGGSGGYAAALRATQLGMSVALIERDKLGGTCLHRGCVPTKALLHAAEL
ADGARDGAKYGVLSSFAGIDMAGVTRYREGVVAGKYKGLQSLVSSRGITVISGEGRLTAP
GTVTVGEHVVHGSSIVVATGSASRTLPGIEIGGRVLTSDQALELDHVPSRVVVLGGGVIG
VEFASVWRSFGAEVTIVEALDHLVPNEDESVSKQLERAFRRRGIAFQLGSRVASVSQSDE
GVRVSLEGGATVEGELLLVAVGRGPVTAGVGLEEVGVRLDRGYVLTDERLQTSVPGVYAV
GDIVPGLQLAHRSFQQGIFVAEEIAGLGPQIVSDVNVPKVTYSDPEVASVGLSEERAIAE
FGAERISTYDYGLGGNARSTIIGTTGSVKVVRVVDGPVVGVHMVGARVGELIGEAQLIVN
WEAHPEDVAPLVHAHPTQNEALGEAHLALAGKPLHAL
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgtcggaagagcgctacgacctggtcgtgctcggtggtggcagcggtggatatgcggca
gccctgcgggcgacgcagctcgggatgagcgttgcgctcatcgagcgggacaagcttggc
ggcacgtgcctgcaccgcggttgcgtgccgacgaaagcgcttctgcacgccgctgagctg
gccgacggcgcccgcgacggagcgaaatacggcgtgctctcgagcttcgccgggatcgac
atggcaggcgtcacccgctaccgcgagggcgttgtggcgggcaagtacaagggtctgcag
agcctcgtgtcctcgcgggggatcaccgtgatctctggggagggacgtctgacggctccc
gggacggtgacggtcggcgagcatgttgtgcacggatcgtcgatcgtcgtcgcgacgggg
tctgcgtcgcgcacccttcccggtatcgagatcggcggacgcgttctcacgagtgaccag
gccctcgaactcgaccacgttccctcgcgggtagtggtccttggcggcggagtgatcggc
gtcgagttcgcgagcgtctggcgatccttcggcgccgaggtcaccattgtcgaggcgctc
gaccacctcgtgcccaatgaggatgagagcgtcagcaagcaactggagcgggctttccgg
cgtcgcggcatcgcctttcaacttggctcccgcgtcgcctcggtgtcgcagtcggacgag
ggcgtgagggtctcgctcgagggcggagcgaccgtcgagggcgagctgctcttggtcgcc
gtgggccgcggccccgtgaccgcgggcgttggcctcgaggaggtcggagtccgcctcgac
cgcggctacgtgctgacggacgagcgcctgcagacctccgtgcccggggtgtatgcagtg
ggagacatcgtgcccggcctccaactcgcgcaccggagcttccagcagggcatctttgtc
gcggaggagatcgccggtctcggtcctcagatcgtctcggacgtcaacgttccgaaagtg
acctacagcgaccccgaggtcgcttcggtcggcctcagcgaggagcgcgcgatcgccgaa
ttcggcgccgagcgcatatcgacctacgactacggcctgggcggcaacgcacgcagcacc
atcatcggcacgaccggttccgtcaaagtagtgcgggtggtggatggccccgtcgtggga
gtccacatggtcggcgcccgtgtgggcgaactgatcggcgaggcgcagctcatcgtgaac
tgggaagcccatcccgaggacgtcgcgcctcttgtccacgcgcatccgactcagaacgag
gcgctcggcgaggcgcacctcgctctggccggcaagcctttgcacgcactgtag

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