KEGG   Rathayibacter iranicus: C7V51_06570
Entry
C7V51_06570       CDS       T05878                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ria  Rathayibacter iranicus
Brite
KEGG Orthology (KO) [BR:ria00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ria03016]
    C7V51_06570
Enzymes [BR:ria01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     C7V51_06570
Transfer RNA biogenesis [BR:ria03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C7V51_06570
 Prokaryotic type
    C7V51_06570
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C TruB-C_2
Other DBs
NCBI-ProteinID: AZZ55587
UniProt: A0AAD1ELZ3
LinkDB
Position
complement(1409572..1410486)
AA seq 304 aa
MAPNGILLLDKPGGITSHDLVSRTRRRAGTRKVGHAGTLDPMATGLMILGLGASTRLLTY
LVGLDKQYEATIRLGASTTTDDQEGELLDSAEPGLAAALAPEAVAAAVAALTGAIEQVPS
AVSAIKVDGRRAYARVRNGEEVVLPARPVTVSGFDVLARREVDGFLDLDVRVTCSSGTYI
RALARDLGAALGVGGHLTALRRTAVGPFTVAQAGDIDELDVPASLLQPIVVASELFPLLR
LDARVAADLANGKRIPVPQEAVGVEGLLAAVGPGERLIGLAERRGTQLKSVVNFPTGEVR
TDAS
NT seq 915 nt   +upstreamnt  +downstreamnt
gtggctccgaacgggattctcctgctggacaagcccggcggcatcaccagccacgatctt
gtctcgcggacccgtcgtcgcgccggcacgcgcaaggtcggccatgccgggacgctcgac
ccgatggcgaccgggctgatgatcctgggcctcggcgcctcgacgcggctgctgacctac
ctggtggggctcgacaagcagtacgaggcgacgatccgcctcggcgcctcgaccaccacc
gacgaccaagagggcgagctgctcgattccgccgagcccggtctcgccgccgcactcgcc
ccggaggcggtggccgccgcggtcgcggcccttaccggcgcgatcgagcaggtcccgagc
gccgtcagcgcgatcaaggtcgacggccgccgcgcctacgctcgggttcggaacggggag
gaagtcgtgctcccggcgcgccccgtgacggtctcgggcttcgacgttctcgcccggcgc
gaggtcgacggcttcctcgacctcgacgtgcgcgtcacctgctcatccggcacctacatt
cgcgccctcgcccgcgatctgggtgccgcgctcggcgtcggtgggcacctcaccgcgcta
cgccggacggcggtcggacccttcaccgtcgcgcaggccggtgacatcgacgagctcgat
gtccccgcatccctgctgcagccgatcgtcgtcgcaagtgaactctttccgctcctgcgc
ctggacgccagggtggcggcagacctcgccaacggcaagcgcatcccggtgccgcaggag
gccgtcggcgtggagggcctgctcgctgccgtcggcccgggggaacgcctgatcggcctt
gccgagcgccgcggcactcagctgaaaagcgtcgtcaacttcccgaccggcgaggtccgg
acggacgcgtcgtga

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