Rathayibacter iranicus: C7V51_06880
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Entry
C7V51_06880 CDS
T05878
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ria
Rathayibacter iranicus
Pathway
ria00300
Lysine biosynthesis
ria00470
D-Amino acid metabolism
ria01100
Metabolic pathways
ria01110
Biosynthesis of secondary metabolites
ria01120
Microbial metabolism in diverse environments
ria01230
Biosynthesis of amino acids
Module
ria_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7V51_06880 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C7V51_06880 (lysA)
Enzymes [BR:
ria01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C7V51_06880 (lysA)
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AZZ57365
UniProt:
A0AAD1AHR5
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All DBs
Position
complement(1479552..1480985)
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AA seq
477 aa
AA seq
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MDTDVARAPRHPLAPEWLRTPDDANALAEGVWSDGVRRDEHGTLSVAGVSVDALVRDYGT
PLYVVDETDARRRAAEMREAFAREFGRIGTGVTVYYAGKAFLSTEVARWMRDEGLNLDLS
SGGELAVALAAGIEPARFGLHGNNKSLAEIDRAVEVGAGTIVLDSLIEIERVAAAAERHG
RVQAVRLRVNSGVHAHTHEFLATAHEDQKFGLTLGDCPAAVARIRSLPSLRLLGLHCHIG
SQIFGAAGFAESASRLLDVHAALLADGPVPELNLGGGFGIAYTSADDPTPIGEIAAAVAD
AVAEQCAARGIPVPHIAIEPGRSVIGPAGLTLYEVGTVKDVVVGAAGATAVRRYVSVDGG
MSDNARPALYGADYTARIANRCSPAQPALVRVAGKHCESGDIVVHDDFLPADVRPGDLLA
VAATGAYCWSLASNYNYLGRPPVVAVRGGRARVLVRGETEEDLLRRDAGIERKGTSR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggacactgacgtcgcccgcgccccccgccatccgctcgctcccgagtggctgcgcacg
cccgacgacgcgaatgcgctcgccgagggcgtctggtcggacggcgtccggcgtgatgag
cacggcacgctcagcgtggccggtgtgtcggtcgacgcgcttgtccgcgactacggcact
cctctctatgtggtcgacgagacggatgcgcgccgccgggctgccgagatgcgtgaggcc
ttcgcccgcgagttcggccgcattgggacgggcgtcaccgtctactacgcgggcaaggcg
ttcctctcgaccgaggttgcccgttggatgcgtgacgagggcttgaacctcgatctctcg
agcggaggtgagctggccgtcgcgctggccgcgggcatcgagcctgcgcgcttcggcctg
cacggcaacaacaagtcgctcgccgagatcgatcgggccgtcgaggtgggcgcgggcacg
atcgtgctggacagcctcatcgagatcgagcgcgtcgcggccgcggccgagcggcacggc
cgggtgcaggccgtccgcctccgcgtgaacagcggagtgcacgcgcacacccacgagttc
ctcgccaccgcgcacgaggaccaaaagttcggcctcacgctcggcgattgcccggccgcg
gttgcgcgcatccgctcgctcccctcgctcagactgctcggcctgcactgccacatcggg
tcgcagattttcggcgccgccgggttcgcggagtcggcatcccgcctcctcgacgtgcac
gcggctctgcttgccgacgggccagtgcctgaacttaacctcggcggtggcttcggcatc
gcctacacgagcgccgacgacccgacgccgatcggtgagatcgcagcggccgtggccgac
gcggtggccgagcagtgcgcggcgcgcgggatcccggtgccgcacatcgcgatcgagccg
gggcgctccgtcatcggacccgcgggcttgaccctctacgaggtcggcacggtgaaggat
gtggtggtcggcgcggcgggggcgaccgcggtgcgccgctacgtcagcgtcgacggcggc
atgagcgataacgcccgtcccgccctctacggagccgactacacggcgcggatcgcgaat
cgctgttctcccgcacagcccgcgctggtgcgagtcgccggcaagcactgtgagtcgggc
gacatcgtcgttcacgacgacttcctgccggccgatgtgcggcccggcgacctgctcgcg
gtcgcggcgaccggcgcctactgctggtcgctcgcgagcaactacaactacctcggccga
cccccggtcgttgctgtccgcggcggtcgcgcccgcgtcctggtccgcggcgagaccgag
gaggatctcctccgccgcgatgccggcatcgaacgaaagggcacctcccgatga
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