Rathayibacter iranicus: C7V51_08800
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Entry
C7V51_08800 CDS
T05878
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ria
Rathayibacter iranicus
Pathway
ria00260
Glycine, serine and threonine metabolism
ria00460
Cyanoamino acid metabolism
ria00630
Glyoxylate and dicarboxylate metabolism
ria00670
One carbon pool by folate
ria00680
Methane metabolism
ria01100
Metabolic pathways
ria01110
Biosynthesis of secondary metabolites
ria01120
Microbial metabolism in diverse environments
ria01200
Carbon metabolism
ria01230
Biosynthesis of amino acids
ria01240
Biosynthesis of cofactors
ria04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C7V51_08800
09102 Energy metabolism
00680 Methane metabolism
C7V51_08800
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C7V51_08800
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C7V51_08800
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C7V51_08800
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C7V51_08800
Enzymes [BR:
ria01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C7V51_08800
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
PALP
SelA
Motif
Other DBs
NCBI-ProteinID:
AZZ55962
UniProt:
A0AAD1EMB7
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Position
complement(1895933..1897225)
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AA seq
430 aa
AA seq
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MSSSSAPSTGLAASFDEPVSVVDPEIAAVLQQELDRQRGYLEMIASENFVPRAVLESQGS
VLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKALFGAEFANVQPHSGATANAAALAAL
IQPGDTILGLELAHGGHLTHGMKLNFSGKLYNATSYGVDPQTFRIDMDAVREKALEVRPQ
VLIAGWSAYPRHLDFAAFRAIADEVGATLWVDMAHFAGLVAAGLHPSPVPHADVVTSTVH
KTLAGPRSGLILAKQEYAKKLNSAVFPGQQGGPLMHVIAAKATAFKLAGGAEFADRQART
IRGAQILAERLTAADTKAEGIDVLTGGTDVHLVLADLRNSPLDGQQAEDRLHEVGITVNR
NAVPFDPRPPMVTSGLRIGTPALATRGFGDAEFTEVADVIAEALKPSADLEALRTRVARL
TDDFPLYPGL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcttcctctgccccgagcaccggtctcgccgcgtcgttcgatgagcccgtctcg
gtcgtcgaccccgagatcgccgccgtcctccagcaggaactcgaccgccagcgcgggtac
ctcgagatgatcgcgagcgagaacttcgtgccgcgtgccgtcctcgagtcgcagggctcc
gtcttgaccaacaagtacgccgaggggtacccgggacgccgctactacggcggctgcgag
ttcgtcgatgtcgccgagcagctcgcgatcgaccgggcgaaggcgctcttcggggcagag
ttcgcgaacgtgcagccgcactcgggtgcgaccgccaacgccgcggcgctcgccgcgctg
atccagcccggcgacacgattctgggcctcgagctggcgcacggcgggcacctcacgcac
ggcatgaagctgaatttctcgggcaagctctacaacgccacttcctatggcgtcgacccg
cagaccttccggatcgacatggacgccgtccgcgagaaagctctcgaggtccgcccgcag
gtgctcatcgccggctggtccgcctacccacgccacctcgacttcgcggcgttccgtgcc
atcgcggacgaggtgggcgccacactctgggtcgacatggcgcacttcgccggcctcgtc
gccgccgggctgcacccgtcaccggtgccgcacgccgacgtcgtcacctcgacggtgcac
aagacgctcgccggcccgcgctcgggcctcatcctggctaagcaggagtacgcgaagaag
ctcaactcggccgtgttccccgggcaacagggcggaccgctgatgcatgtcatcgccgcc
aaggcgaccgcgttcaaactcgctggcggggccgagttcgccgaccgccaggcgcggacc
atccggggcgcgcagattctcgcggagcgcctgaccgcagccgacacgaaggccgagggc
atcgacgtgctcaccggcggcaccgacgtgcacttggtgctggccgatctgcggaactcg
ccgctcgacggccagcaggccgaggaccgcctccacgaggtgggcatcacggtaaaccgc
aacgcggtgccgttcgaccctcgcccgccaatggtcacatcgggcctgcggatcgggacg
cccgcgctcgcgacccgcggcttcggcgacgccgagttcaccgaggtcgccgacgttatc
gccgaggcgctcaagccctcagccgatctggaggcgctacgcactcgcgttgctcgcctc
accgacgacttcccgctgtaccccgggctgtag
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