Rathayibacter iranicus: C7V51_09450
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Entry
C7V51_09450 CDS
T05878
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ria
Rathayibacter iranicus
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ria03032
]
C7V51_09450
03400 DNA repair and recombination proteins [BR:
ria03400
]
C7V51_09450
Enzymes [BR:
ria01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C7V51_09450
DNA replication proteins [BR:
ria03032
]
Prokaryotic type
DNA Topoisomerases
C7V51_09450
DNA repair and recombination proteins [BR:
ria03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7V51_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF58
Motif
Other DBs
NCBI-ProteinID:
AZZ56081
UniProt:
A0AAD1AGZ4
LinkDB
All DBs
Position
complement(2024442..2025425)
Genome browser
AA seq
327 aa
AA seq
DB search
MADTRAQRLRRTDSSGRGYTRVRAGSGFSYRDPRGATVTDQELRSRFDALGIPPAWKDVW
IAPYPNGHIQAMGIDAAGRRQYVYHPTWREQKDRLKFDRALRLAEALPGARRAVTLALRS
EGPTRDRALATAFRMLDTGSLRVGSERYAKEHGSIGLSTLLCSHATTHGDRVALAFPGKS
HQAWTSEILDRDLSRVVRALKRRGPNARLLAWKDGKQWRPISAPEVNDYVRERAGDDFTA
KDFRTLHGTVAAALSLAKAGPQSTQRARNAAIAQAMRDASEVLGNTPTVARTSYVDPRLL
DHFRAGETIDPSRPASAETTLRALLFE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactcgtgctcaacgactccgcaggaccgactcaagcggtcgtggctacacc
cgggtcagggcgggatccgggtttagctaccgcgaccctcggggcgcgacggtcaccgac
caggaacttcgctcgcggttcgatgcgctgggtattccgccggcctggaaggacgtctgg
atcgcgccgtaccccaacggccacatccaggcgatgggcatcgatgcggctgggcgacgg
caatatgtctaccatccgacctggcgcgagcagaaggatcggctcaagttcgaccgggcg
ctgaggctcgcggaggccctacccggtgcccgacgcgcagtcaccctggcactgcgatcc
gagggaccgacgcgcgatcgcgctctcgcgaccgcctttcggatgctcgacacgggttct
ctccgtgtcggcagcgagcgctacgcgaaggagcacggcagcatcggcctctcgacgctg
ctgtgctcgcacgccaccacgcacggcgaccgggtcgcgctggcgttccccggcaagagc
catcaggcctggacgagcgagattctcgaccgcgatctctcgcgagtcgtccgggcgctg
aagcgcagaggaccgaacgcgcgcctgctggcctggaaggacggcaagcagtggcgcccg
atctcggcgccggaggtcaacgactacgtgcgggagcgggcgggcgacgacttcacggcc
aaggacttccgcacgctgcacggcaccgtcgccgccgctctcagcctcgccaaggcaggc
ccgcagtccactcagcgtgcccggaacgctgcgatcgcgcaggccatgcgcgatgcctca
gaggtgctcggcaacacccccacggtcgcccgcacgagctacgtcgacccccgcctgctc
gaccactttcgcgctggcgagacgattgacccctcgcgccccgcctccgctgagacaacg
ctccgcgccctcctcttcgagtaa
DBGET
integrated database retrieval system
