Rathayibacter iranicus: C7V51_11795
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Entry
C7V51_11795 CDS
T05878
Name
(GenBank) type IV secretion protein Rhs
Organism
ria
Rathayibacter iranicus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
Motif
Other DBs
NCBI-ProteinID:
AZZ56483
LinkDB
All DBs
Position
2517973..2523468
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AA seq
1831 aa
AA seq
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MADLGAIEEDVPFDTGLAESVISAFTDAAATLEGQAGTRAAAATSALAEFRGRFAELFRQ
NAQTGAGDAVELAARLKEVAVAVGRLRDEAAKEQQRRVLAREWKRKKDSRNLFEQIGEGL
FGEEDPPVGPPAEEVSIPVQEASVRARETPAPGGGGMGGGTSSARPDDLRAFADTSSVAN
DDLRDRPARLRALVTDFTDRCRWGHMDAEGVVSGFTSWLAANDQDVVWARSIADAFTAAG
GDGVVSTVADSALAVAVAAAGVTLSREDLTIGAAQVFGAAPTSGYADDPVNTSTGNFLDT
EVDLGFPGGAGSLRLERTYNSLDLSEGAFGPGWSSVTEVRLRVGDDGATLVLPDGRELLF
PRQGDGWDRAVGENRWLTREIDPERAGERLVVSGNDGSRWVFTVAGRWLSAGSGPGTRVD
VEYDGDGALSRLVHERGRWVAVEWSGGRVVVAAASDGRRVEYEYDEGRLVAVSGPGGTRR
YGWNPDGLLESVTDAAGVLEVRNTFDARRRVRTQASPFGRTTRYAYLPGRATVVSDTDGS
RSNTWISDTRGRLVGVVDPLGRRQSMSYDAAGNLLAATGRDGTITAHAYDSRGRRTRTKT
ASGASITRTYDEFDRVVTVTAEADSITRYEYADETARSPSIVIDPEGGRTHLTWDAGLLI
EVTDPEGVTVRLGYDSFGDLVTTTDADGNTARLLRDEAGRVVAAVSPSGARTEYRYTPTG
QLASRRNPLGATWRYEYDGGGRLTGIVDPLGARTRMEHGEHGAVSRTVDPLGRVIGREFD
DLGNVSAAILPDGTSWQFGYDALSRLTETTDPAGHLWRREYDADGGLSALIDPTGMRASV
FTDPRTTAVSDGTVSSRTRFDPLGRPVATEAQDGSTALTVYDRCGRPVELVDEEGALTRL
TRDAAGRIIEQTIPSGATTRFEYDRCGRLTAITDPAGARTTLEYDADGRHTRWTGPTGDT
GWSEYDAAGRVTARHSPGRGTARYRYDLLGRVVWSRDSWHGTRRYRYDPAGQLIEAVNGV
GGVTRYEYDQRGRNTTITDPLGGITRRVFDAADHAVAATDPLGRTTTAGYDPAGRQLWQQ
NPDGHRLSWTYDTSGRETSLSADGRLLSETRRDLSARQAVITDHTAPDGPIEHTLAWNRR
DQLIRRTRNGHGLAWEYDADGNRTAMVGPDGARTRYERDSTGRVTAIEHPSLGRASFEYD
AAGHLTASTAGGITQSWRHHDGYVTEHTTQTGSGTGSGAGRTRVIRDEDGRITRLDGPTG
SVEYRYDHAQQLLETRTNTGTNAGAGTGASTFEYDAGGRLTRETGPDGRTSVHEYDAAGQ
LLATTRDDGSRIEYRYDGLGRRTHVTAADGSHRSYAWSPAGWLDTITDTTPHGTTTTALH
VDTLGELASINGATTWWDTASYAPALLAVGDTPILATPGGVTGIGDTWTGGSWRAERATN
ADDLWGVGPDTGLPPGITLPAGISITGSGGLAIAGLEWLGHRAYDPGTRGFLTVDPLDPI
TGAGWSGNPYSYAGNDPLHALDPTGLRPVTDAELQAYRNGNNGAFAAAQDWWSNNWEYVA
AGAAIVGGIALMFTGVGGPVGMALIGAASGALLSGGMSIAGQKAANGSVDWGQVGIDTAV
GALGGGAGGAATAAARQAGAGVFKAEMIGALADSNVSTTADYLTSPGPHTTDNLLAASAG
GLAAGGLGGAAGRRLSGAIGAERLADAALTPVSRRLTGAALVNKGKRGVQASIDALEARG
DTLVGTEITIDVEGVRTRIDILAEEPSGTRYITEAKNGPRAELTKNQEIAFPLIREGKGA
IPTGRRAEEAGLEPGQPLKPMEVREDRWDIG
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatttgggtgcgatcgaggaggacgtcccgttcgataccgggcttgcggagtcg
gtgatctcggcgttcacggatgctgcggccacgctggagggtcaggcggggacccgggcg
gcggcagcgacgtcggcgttggcggagttccgtggccgtttcgcggagttgtttcgccag
aacgcgcagaccggtgcgggggacgcggtcgagttggcggcgcgtctgaaagaggtcgcg
gtcgcggtgggccggttgcgggatgaggctgcgaaggagcagcagcggcgtgtgctggcg
cgggagtggaagcggaaaaaggattcccggaatctgtttgagcagatcggggagggtctg
ttcggggaggaggatccgccggtgggtccgcctgcggaggaagtgtcgatcccggttcag
gaggcgtcggttcgggctcgggagactcccgcgccgggtggcggggggatgggtgggggg
acgtcgtcggcgcggccggatgatctgcgggcgttcgcggatacgtcgtcggtggcgaat
gatgacctgcgggatcgtccggcgcgcctgcgggcgttggtgacggatttcacggaccgg
tgccggtgggggcatatggacgcggagggggtggtgtcggggttcacgtcgtggttggcg
gcgaatgatcaggacgtggtgtgggcgcggagcatcgcggacgcgtttacggccgcgggc
ggtgacggggtcgtgtccaccgtcgccgacagcgcgttggcggtcgcggtggcggccgcg
ggcgtgacgctgtcgcgggaggatttgacgattggtgcggcgcaggtgtttggggcggcg
ccgacgtcggggtatgcggatgacccggtgaatacgtccacggggaacttcctcgacacg
gaagtcgatctcgggttccccggtggtgcggggtcgttgcggctggaacgcacctacaac
tccctcgacctgagcgagggcgcgttcgggccgggctggtcctcggtgaccgaagtgcgc
ctgcgggttggggacgacggcgcgactctcgtcctccccgacggccgggagctgctgttc
ccccggcagggcgacggctgggaccgcgcggtgggcgagaaccggtggctgacccgggag
atcgacccggagcgcgcgggtgagcgtcttgtggtgtccgggaacgacggctcccggtgg
gtgttcactgtggccggccggtggttgtccgcggggagtggtccggggacgcgggtggac
gtcgagtacgacggcgacggtgccctgtcccggctggtgcatgagcggggccggtgggtc
gctgtggagtggtcgggcggccgggtggttgttgcggcggcgtcggatggtcgccgggtg
gagtacgagtacgacgagggccgcctggtcgcggtgtccgggccgggtgggacgcgccgg
tacgggtggaacccggacgggctgctggagtcggtgacggatgcggccggggtgctcgag
gttcggaacacgttcgacgcgcggcggcgagtgcgtacgcaggcgtcgccgttcgggcgg
acgacccggtatgcgtatctccctggccgggcgacggtcgtctcggacacggacgggtcg
cggtcgaatacgtggatttcggacactcggggtcgtctggtgggggtggtggatccgttg
gggcggcggcagtcgatgagttacgacgctgccgggaacctgctcgccgcgaccggccgc
gatggcacgatcaccgcgcacgcctacgactcccgcggccggcgcacccgcacgaaaacg
gcgtccggcgcgagcatcacccgcacgtatgacgagttcgaccgggtggttaccgtcacc
gccgaggcggacagcatcacccgctacgaatatgcggatgagacggcgcggtcgccgagt
atcgtgatcgacccggaaggcggccgcacccacctcacctgggatgcggggctgctgatc
gaggtcaccgacccggaaggcgtcaccgtccgtctcggctacgactccttcggggacttg
gtcaccaccacggacgccgacgggaacaccgcccggctgctgcgggatgaggcgggccgc
gtggtcgcggcggtatccccgtcgggcgcgcggaccgagtaccgctacaccccgaccgga
cagctcgcttcccgccggaacccgctcggcgcgacgtggcggtatgagtacgacggcggc
ggacgcctgaccgggatcgttgatccgctcggcgcccgcacccggatggaacacggggag
cacggcgcggtgtcccggacggtcgatccgttggggcgggtgatcggccgggagttcgat
gacctcggcaacgtgtccgccgcgatcctccccgacgggacatcgtggcagttcgggtac
gacgccctgtcccgcctcaccgagaccacggatcccgcggggcatttgtggcgtcgcgag
tacgacgcggacggcggcctgagtgccctgatcgacccgacggggatgcgggcgagtgtg
ttcaccgatccgcgcacgacggccgtctccgacgggacggtgtcctcccgcacccgcttc
gaccccctcggccggcccgtcgccactgaagcgcaggacgggtccacggcgctcaccgtg
tatgaccggtgcgggcgccccgtggaactcgtcgacgaggaaggagccctcacccgcctc
acccgcgacgccgccgggcgcatcatcgaacagaccatcccctccggcgcgacgacccgg
tttgagtacgaccggtgcggacgcctcaccgcgatcaccgaccccgccggcgcccgcacc
accctcgagtacgacgccgacggacgccacacccgatggaccggacccaccggagacacc
ggctggagcgaatacgacgcggccggccgcgtcaccgcccgccacagccccggtcgcggg
acggcccggtaccggtacgacctgctcgggcgggtcgtgtggtcgcgggactcctggcac
gggacccgccgataccggtacgaccccgccgggcaactcatcgaagccgtcaacggggtc
ggcggagtcacccgatacgagtacgaccagcgcggccgcaacacgaccatcaccgacccg
ctcggcgggatcacccggcgggtgttcgacgcggccgaccatgcggtcgcggcgaccgat
ccactcggccggaccacgaccgccggttacgacccggcgggacgtcaactgtggcagcag
aaccccgacgggcaccgcctgtcctggacctacgacacgtctggccgcgaaaccagcctc
agcgccgacggacgcctgctctccgaaacccgccgcgacctatcagcccgccaggcagtc
atcaccgaccacaccgcacccgacggacccatcgaacacacgctcgcctggaaccgccgg
gaccagctcatccgccgcacccgcaacggccacggcctcgcgtgggagtacgacgccgac
ggaaaccggaccgccatggtggggccggatggggcgcggacccggtatgaacgcgacagc
accgggcgggtcaccgcgatcgaacaccccagcctgggccgcgcgagcttcgagtacgac
gccgccggacacctgaccgcgtccaccgccggcggcatcacccagtcctggcgacaccac
gacgggtacgtcaccgaacacaccacccagaccggcagcgggaccggcagcggggcgggg
cggacgcgggtgatccgggatgaggacggccgcatcacccgcctcgacggacccaccggc
agcgtcgaataccggtacgaccacgcccagcaactcctcgaaacccgcaccaacacgggc
accaacgcgggcgcgggcaccggtgcgtcgacgttcgagtacgacgctggcggacgcctc
acccgcgaaaccggccccgacggccgcacgagcgtccacgaatacgacgccgccgggcaa
ctgcttgccaccactcgggatgacggctcccggatcgagtaccgctacgacggcctcggc
cgccgcacccacgtcaccgccgccgacggcagccaccgctcctacgcctggagccccgcc
ggctggctcgacaccatcaccgacaccaccccacacggcaccaccacgaccgccctgcac
gtcgataccctcggcgaactcgccagcatcaacggggctaccacctggtgggacaccgcc
tcctacgcccccgcactcctcgcggtaggtgacactccgatccttgccacgccgggaggc
gtcaccggcatcggcgacacctggaccggcggcagctggcgggccgaacgcgcgaccaac
gccgacgacctctggggcgtcggccccgataccggactgccgcccggcatcaccctcccc
gccgggatcagcatcaccgggtccggtggcctcgccatcgcgggactggaatggctcggc
caccgcgcctacgacccggggacccggggcttcctcaccgtggatcccctcgaccccatc
accggcgcgggctggtccgggaacccgtactcgtacgccggcaacgaccccctccacgcc
ctcgaccccaccggactgcgccccgtcaccgacgcggaactccaggcctaccgcaacggg
aacaacggcgcattcgccgccgcccaagactggtggtcgaacaactgggaatacgtcgcc
gcgggcgccgcgatcgtcggcggcatcgccctcatgttcaccggtgtcggcggacccgtc
ggcatggccctcatcggagccgcgtcgggtgctctcctgtccggcggaatgtccatcgcc
ggacagaaagccgccaacggcagcgtcgactggggccaagtcggcatcgacaccgccgtc
ggagcactcggcggcggcgccggaggagcagccaccgccgccgccagacaagcaggcgcc
ggcgttttcaaagccgagatgatcggcgccctcgccgacagcaacgtcagcacaaccgcc
gactacctcaccagccccggaccccacaccaccgacaacctcctcgccgccagcgcagga
ggactcgccgccggcggcctcggaggcgccgccggccgacgcctcagcggagccatcggc
gccgaacgcctcgccgacgccgccctcacacccgtctccagacgcctcaccggagccgcc
ctcgtcaacaaaggcaaacgcggcgtccaagcctccatcgacgccctcgaagcacgcggc
gataccctcgtcgggaccgagatcacgatcgatgtcgaaggcgtccgaacacgaatcgac
atcctcgccgaagaaccatccggcaccaggtacatcactgaagcgaagaacggaccgcgt
gcggaactcacgaagaaccaggaaatcgctttccctctcatcagagaagggaaaggtgcc
atacccaccggccggagagctgaagaagctggcctcgaaccaggacaaccattgaaaccg
atggaagtaagagaagatcgttgggacataggttag
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