Rathayibacter iranicus: C7V51_14380
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Entry
C7V51_14380 CDS
T05878
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ria
Rathayibacter iranicus
Pathway
ria03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7V51_14380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ria03019
]
C7V51_14380 (recQ)
03400 DNA repair and recombination proteins [BR:
ria03400
]
C7V51_14380 (recQ)
Enzymes [BR:
ria01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7V51_14380 (recQ)
Messenger RNA biogenesis [BR:
ria03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7V51_14380 (recQ)
DNA repair and recombination proteins [BR:
ria03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7V51_14380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZZ56933
UniProt:
A0AAD1AEY1
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All DBs
Position
3055919..3058015
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AA seq
698 aa
AA seq
DB search
MTDPTATVFAASTTPAAQAEPRGDASAAQAILEKVFGYASFRGEQQAIVEQVIHGGDAVV
LMPTGGGKSLCYQIPAIVRPGTGVVVSPLIALMQDQVDALRANGVRAEFLNSTQDAGERN
RVERAYLAGELDLLYVAPERLGNEGTKQFLARGRIALFAIDEAHCVSQWGHDFRPDYLAL
GELAERWPDVPRIALTATATEATHREITTRLHLGAARHFVSSFDRPNIQYRIVNKVEPRK
QLIDFLRREHAHDAGIVYALSRKSVEATAEALRTAGFDAVAYHAGLDSRVRAAAQSRFLR
EEGVIVCATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQD
VVQQRRMIDESPGDLAHRRRMSAHLDAMLALSETVQCRRVNLLAYFGQQSTACGNCDTCL
EPPASWDGTVAAQKFLSTVVRLKRERNQQFGAGHIIDIVRGKTTPRTTQYKHDALATWGI
GADLSDTQWRGVARQLLAQGLLGVNDDGFGTLVITPASASVLSGERTVELRQEPEKPTRS
SGATRSGRSAVAELSGEAQPLFERLREWRAAQARAQSVPAYIVFNDATLREIATTEPATM
DALSIIGGVGQKKLLTYGDAVLAVVAGQTPEIVAPEPSEEAPAPRRSPPARGGGSRSGGA
TPSFGREPARPPVSSAEPPEDDWVPPDEPDWEPGWDSY
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaccccaccgcaaccgtctttgccgcttccaccacgcccgccgcccaggcggag
ccccgtggcgacgcgagcgcggctcaggcaatcctcgagaaggtcttcggctatgcatcc
ttccgcggtgagcagcaggccatcgtcgagcaggtcattcacggaggtgacgccgtcgtc
ctcatgcccaccggtggcggcaagtccctctgctatcagatcccggcgatcgtgcgcccg
ggtaccggcgtggtcgtctctccgcttatcgccctcatgcaagaccaggtcgacgccctg
cgcgccaacggcgtgcgcgccgaattcctcaactccacgcaggacgcgggcgagcgtaac
cgcgtcgagcgcgcctacctcgctggcgaactcgacctgctttatgtcgcccccgagcgc
ctcggcaacgagggtacgaagcagttcctcgcccgcggacgcatcgctctcttcgccatt
gacgaagcgcactgcgtcagccagtggggccacgacttccgccccgactacctcgctctg
ggcgaactcgccgagcgctggcccgacgtcccccgcatcgccctcaccgcgaccgccacc
gaggccacccaccgcgagatcaccacccggttgcacctgggcgcggcccgccacttcgtc
tcgagcttcgaccgccccaacatccagtaccgaattgtcaacaaggtggagccgcgtaag
cagctgatcgacttcctccgccgcgagcacgcgcacgacgcgggaatcgtttatgcactc
tcgcgcaagagtgtggaggcgacagccgaggcactgcgcacggccggtttcgatgcggtc
gcgtaccacgcaggtctcgactcccgcgtccgggccgccgcccagtcgcggttcctccgc
gaggagggcgtgatcgtctgcgccaccatcgccttcggcatggggatcgacaagccagat
gtccgcttcgtcgcgcacatcgatttgcccaaatccgtcgagggctactaccaggagacg
ggtcgcgccggtcgcgacggcctgccctccaccgcctggctcgcctacggcctgcaggac
gtcgttcagcagcgtcgcatgattgacgagtcgcccggcgatctcgcgcatcgtcggcgg
atgtccgcgcacctcgacgccatgctcgccctctccgagacggtgcagtgccgccgggtc
aacctgctcgcctacttcggccagcagagcaccgcctgcggcaactgcgacacctgcctt
gagccgccagcctcgtgggacggtacggtcgcggcgcagaagttcctgtcgacagtggtg
cgactcaagcgcgagcgcaaccagcagttcggcgcaggccacatcatcgacatcgtgcga
ggcaagaccacgccgcgcaccacccagtacaagcacgatgccctcgccacctggggcatc
ggcgccgacctcagcgacacccagtggcgcggagtcgcccgtcagctcctcgcgcagggg
ctgctcggagtgaacgacgacggcttcggcacgctggtaatcactcccgcctccgcctcg
gtgctcagtggtgagcgcacggtcgagctgcggcaggagcccgagaaaccgacgaggtca
agcggagccacgcgctccggccggtccgccgtcgccgagctttccggagaggcgcagccc
ctcttcgagcgccttcgggagtggcgcgccgctcaggcacgggcacagtctgtccccgcg
tacatcgtgttcaacgacgcgaccctccgcgagatcgcaacgaccgaaccggccacgatg
gacgcgctcagcatcatcggcggcgtcggccagaagaagctgctcacctacggtgacgcg
gtcctcgcggtcgtcgccgggcagactccagagatcgtcgcaccggagccgagcgaggag
gcgcccgctcctcgtcgcagtccgcccgcccgcggcggcggttcccgctccggaggcgcc
acgccctcgttcggccgtgagcccgctcgcccgccggtctcgtccgccgagccgcccgag
gacgactgggtcccgccggacgaacccgactgggagcccggctgggacagttactga
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