Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_01200
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Entry
BA173_01200 CDS
T05695
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA173_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ric03021
]
BA173_01200
03019 Messenger RNA biogenesis [BR:
ric03019
]
BA173_01200
Transcription machinery [BR:
ric03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BA173_01200
Messenger RNA biogenesis [BR:
ric03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BA173_01200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
ATPase_2
AAA_25
Fungal_virus_P2_C
S1CSD-TOTE-2
Spore_III_AA
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
ASX27538
LinkDB
All DBs
Position
complement(242413..243762)
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AA seq
449 aa
AA seq
DB search
MSITNKESPEQLNNPEFNNHYAENGNIINLKELKRKLPEELQAQAEELKIENVSSLRKQE
LVFAILKKSVEQGGSIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFGLRT
GDTVEGRIRAPKEGERYFALLKVNKVNFEDPSKAYHRVNFDNLTPLYPDEKLGLELEDNS
KDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLLIDERPE
EVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIEKAKRLVEHKKDVVILVDAITRLARAY
NTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMDEVIFEE
FKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIVLNKMWVLRRIIDPMGSSE
AIEFLLKKLEHTKTNSEFFEMMKSPAERK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtataactaataaagaatccccagaacaactaaataaccctgaatttaataatcat
tatgcagaaaacggcaatataattaatttaaaagaattaaaacgtaaattgcctgaagaa
ttgcaagctcaagcagaagagctaaaaattgaaaatgttagttctttacgtaaacaagag
ttagtttttgcaattttaaagaaatctgtagagcagggtggttcaatagtaggtgagggg
gtacttgaagttttgcctgacgggtttggctttttgcgttctccggaagtaaattattta
gcaggacctgatgatatttatatttctccaagccaaattcgtcgctttggtcttcgtact
ggtgatactgtggaaggacgaataagagctccgaaagagggtgagcgttattttgcactg
cttaaagtaaataaagtgaattttgaagatccctctaaggcttatcaccgcgtcaatttt
gataatctcactcctttatatcctgatgaaaaattaggcttagagcttgaagataacagt
aaagattttagtacacgtgttatcgagctagtcgcaccaatgggtaaaggtcagcgtgct
ttaatagttgcacccccccgtactggtaaaactgtattattacaaaatattgcacatgct
attactaccaataatccggaagtatttttaattgtgttgttaatagatgagagacctgaa
gaggtaacggatatgcaacgttccgtgcgtggtgaggttgttagctctacttttgatgag
ccagcaagtaggcacgtacagcttgcggaaatggtcattgagaaagcaaaaagattagta
gaacataagaaagatgtagtgattttagttgatgctattacccgtcttgctcgtgcttat
aatactgtagtgccgtcatctggtaaggtattaacaggcggtgttgatgctaacgcactt
cagcgtccgaaaagattttttggtgctgcaagaaatattgagaatggcggttcactcacc
ataatcggtacggctctaattgaaaccggctcacgtatggatgaggtgattttcgaagag
tttaaaggtacaggtaactctgaaatagtattagatcgtaagattgccgataaacgtatt
tatcctgcaattgatataactagatcaggaactagaaaagaagatttattagttgataaa
atagtgctaaataaaatgtgggttcttcgccgcatcattgacccaatgggtagcagtgaa
gcaatagaattcttgcttaaaaagttagaacacactaaaactaatagtgagttttttgag
atgatgaaaagcccagcagaacgtaagtaa
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