Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_02410
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Entry
BA173_02410 CDS
T05695
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BA173_02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ric03021
]
BA173_02410
Transcription machinery [BR:
ric03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BA173_02410
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Nrap_D6
ParM_N
Motif
Other DBs
NCBI-ProteinID:
ASX27742
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Position
481267..483186
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AA seq
639 aa
AA seq
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MTNTDNNNLNKIDSLLKKAKSKKGSVTYNDINRALPDGTSVEEIDKVMFRFSEAEVDILD
TNEDDAIKIDDMEMEEGFKISTNIDHKPEDETEEENIGTTDDPVRLYLKDMGGVDLLTRE
NEVEIAKRIEEGRKTLIAALCRSPIAMDKFRKWYADLVNENNMLLRDLIDLESNMMHDDE
TSESEDDHNSDHEEEEQDHNHEENILSMSKVETQILPNIIERMKKIAFICEELLIETKKS
FEKSADPKILQNSKKYNDNLELLISEVSEIHFNSKRTEEILSEMYGINRDLINKETAFLK
LAEKYGITRQNFLDEYIGAVINAAWKEKMLKNKKAGWKELLTKESDYIDQMIAELSAIEI
NTGLLVNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKIIRTSRQ
MLNELGYEPTPAEIAARLSMPIDKVRKVMKIAKEPISLENPVGDGDDNSYLGDFIEDKNA
VAPIDAAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIR
QIESKALRKLQHPIRSKKLNSFRSGGKRGDGKPSDLLEA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacagataataataatctaaataaaatagatagtttactaaaaaaagctaaa
tctaaaaaaggttcggttacttataatgatataaatagagctcttcctgatgggacatct
gtagaagagatagataaagttatgtttagattttccgaggcggaagtagatattttagat
actaacgaggatgacgcaattaagattgatgacatggaaatggaagaaggttttaaaata
tccaccaatattgatcataaacctgaagatgaaacagaggaagaaaatataggtactacc
gatgatccggtaaggctttacctgaaagatatgggaggggttgatctacttactcgtgaa
aatgaagttgaaatagcaaaaagaattgaagaaggtcgcaaaacattgatcgctgcacta
tgtagaagtcctattgctatggataagtttagaaagtggtatgcggatttggttaatgag
aataatatgttactgcgtgatctcatagatctagaatctaatatgatgcatgatgatgag
acttcggaaagtgaagacgatcataatagtgatcatgaagaagaagagcaggatcacaat
catgaagaaaatatcttatcaatgtctaaagtagaaacacagatattgcctaatattata
gagcggatgaaaaaaatcgcttttatttgtgaggaattattaattgaaactaaaaaatct
tttgaaaagtctgctgatccaaaaatattacaaaatagtaaaaaatataatgataattta
gaactattaattagcgaagtttcagaaatacattttaattctaaaagaacagaagaaatt
ttatctgaaatgtatgggataaatcgtgatttaataaataaagaaacagccttcttaaag
cttgctgaaaaatacggaataactcgtcagaacttcttagatgaatatataggagccgta
attaatgcagcatggaaagaaaaaatgctgaaaaataagaaagctggttggaaagaattg
ctcactaaagaatcggattatatagatcagatgattgctgaattatcagcgatagagatt
aataccggtcttctagttaatgattttaaaaagttagtaaatactatccaaaaaagtgaa
cgacaaacgttgcaagcgaaaaaagatatgatagaggcgaatttacgcttagtaatatct
attgctaaaaaatatgctaatagaggcttacagtttttagacctaattcaagaaggtaac
ataggacttatgaaagcggttgataaatttgaatatcgccgtggttataaattttctact
tatgcaacttggtggattagacaagcaataacaagagctattgccgatcaagcaaggact
atacgtattcctgtgcatatgatcgaaacaattaataagataataagaacttcaagacaa
atgcttaatgagcttgggtatgaaccaactccagcagaaatagcagcaagactttctatg
ccgattgataaggtaagaaaagttatgaaaatagctaaagagccgattagccttgaaaat
ccggtaggtgatggtgatgataatagttatttaggcgattttattgaggataaaaacgca
gtagcaccaattgatgcggcaattcagtcaaacttacgtgaagttacaactagagtgctt
gcaacccttacgcctcgtgaagaaagggtgcttagaatgcgttttggaataggtatgaat
actgatcatacgcttgaagaagtagggcagcaatttaaagtaactagagaacgtataaga
caaattgagtcaaaagccttaagaaagttacaacatcctatcagatccaaaaagcttaat
agctttagaagcggtggaaaacgtggtgatggtaaaccttctgatttgttagaagcttaa
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