Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_04110
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Entry
BA173_04110 CDS
T05695
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BA173_04110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ric03400
]
BA173_04110
DNA repair and recombination proteins [BR:
ric03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA173_04110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA173_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_25
nSTAND3
RsgA_GTPase
ATPase
DnaJ_CXXCXGXG
CA109-like
Motif
Other DBs
NCBI-ProteinID:
ASX28016
UniProt:
A0A249E2J4
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Position
complement(806829..809690)
Genome browser
AA seq
953 aa
AA seq
DB search
MNQEYIKVRGAKEHNLKNINVDIPRNKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIP
YSPATGLPIHSQTVSEMVDIINELPTETKIYLLAPIVRGHKGEFKREIMNLKKEGFQKLI
VNGETCEIDDLPKLDKNKKHNIEVIVDRIVLDENLGNRLADSLESSLNLADGITYLEIVE
LPTAANTEYEKNQRITFSEKYSCPVSGFQLTEIEPRIFSFNSPFGVCPKCEGIGKEFFFD
RDLIVPDHRISIKDGAIVPWGSTSSKFILETLKALAEHYKFSIESPFSALSDNIKTILFE
GSGEEAIRFEFHDGSKTQVIHQPFAGIIPSLQEKDRTIESVLIKEELAKFKSEHKCTACN
GYRLKDEALCVKIVNIHIGEVADMSIATLQQWFAHLEQKLNKKQLFIAERILKEINERLK
FLMNVGLDYLTLSRESGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNTRLI
ETLKRLRDLGNTVLVVEHDEETMYEADHIIDIGPGAGIHGGRVIAEGNAEEIKNFEESIT
GRYLSGRQTIKVPTQTRTGHDNRAIELIGAVSNNLDNVDIKIPLGTFTAITGVSGSGKSS
LMIHTLYKAALKHLEPTAKVFPGKYQKLKGLEYIDKIIDINQSPIGRTPRSNPATYTGAF
THIRDWFVELPESKARGYKVGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDICNG
HRYNRETLEIKYKGKSIADILMMTVEDAMQFFEKIPLIYEKLITLNEVGLGYIKIGQSAT
TLSGGEAQRVKLAKELSRRSTGKTLYILDEPTTGLHIDDINKLLKVLHKLVDMGNTVLVI
EHNLDVIKTADYIIDVGPEGGDKGGKIVVHGTPADIAACDESHTGRYLKQYLK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaatatatcaaggtacgtggtgctaaagagcacaatctaaagaatataaat
gttgatattccaaggaataaatttgtcgttataaccggtcttagcggttcgggtaaatct
tccttagcgtttgatacgatttatgcagagggtcaaagaagatatgttgagagcttatct
tcatatgcaaggcaatttttgcatttacaaaataagccaaatgttgagtctatttctgga
ttatcgccagctattgcgattgatcagaaaactacttctaagaatccgcgttctacagtt
ggaactataaccgagatttacgattatctcaggttattatatgcaagggttgggattcct
tattctccggcaacgggtcttcctatacatagtcaaactgtttctgaaatggtagatata
ataaatgaattgcctacggaaacgaagatatatttactagctccgattgtcagaggacat
aaaggggaattcaaacgtgagattatgaatctgaaaaaggaaggattccagaagttaatt
gttaatggggaaacttgtgaaatagatgatttgccgaagcttgataaaaataaaaaacat
aatattgaagtaattgttgataggatagttttagatgagaatttaggcaataggctagct
gatagtttagagagttcattaaatcttgctgatggtattacctacctagaaatcgtagaa
ttaccaactgccgctaatactgaatatgaaaaaaatcagcgtataactttttccgaaaaa
tattcttgtccagtgtcaggatttcagcttacagaaattgaaccaagaatattttccttt
aatagtccttttggtgtatgtcctaaatgtgaagggattggtaaagagtttttcttcgat
cgtgatttaattgtaccagatcatagaatatctattaaagatggtgcaatagtgccgtgg
ggcagtacgtcctcaaaatttatcctagagacattaaaagcacttgctgagcattataaa
ttttctatagagtcacctttttcagctttatctgataatattaaaacaattttgtttgaa
ggttctggagaagaggcaataagatttgagtttcatgatggttctaaaacacaagtaatt
catcagccattcgctggaataataccgagtttgcaagaaaaagatcgtactatagaatcg
gttttaatcaaggaagagttagctaaatttaagtccgaacataaatgtacggcttgtaat
ggctataggctaaaagacgaagctttatgtgttaaaatagtaaatattcatataggtgaa
gtagcagatatgagtattgcaacactgcaacaatggtttgctcacctagaacaaaaatta
aataaaaaacaattatttatcgctgaacgtatccttaaagaaattaatgaaagactaaaa
tttttgatgaatgtcgggcttgattacctaacattatcacgagagtctggtactttatca
ggaggtgaaagtcagcgtattcgtcttgcttcgcaaataggatcgggcttaagcggtgtt
ttatacgtacttgacgagccgtccattggcttgcatcaacgtgataatactagattaatt
gaaacgctaaaaaggctaagggatcttggcaatactgttttagtggttgagcatgacgaa
gaaacaatgtatgaggctgatcatattattgatataggacctggtgctggtattcatggt
ggtcgtgttattgctgagggtaatgctgaagaaataaagaattttgaagaaagtattaca
ggaagatatttaagcggtcgtcaaacaattaaagtgccaacgcaaacacgaacagggcat
gataacagagcaatagagcttattggagctgtttctaataatttagataatgtcgatata
aaaatcccgctcggtacatttactgctataacaggggtatcaggaagcggaaaatcaagc
ttaatgattcatactttatataaggctgctttaaagcatctagagcctacagcaaaagta
tttccaggaaaataccaaaaattaaaagggcttgaatatatagacaaaattatcgatatt
aatcagtcaccaataggcagaactccacgttctaaccctgcaacttatactggtgcattt
actcatattagggactggtttgtagaactgcctgagtcaaaagccagaggttataaagtc
ggtaggttttcattcaacgttaagggtggtagatgtgaggcatgtcaaggtgatgggcta
attaagatagagatgcacttcttgcctgatgtatatgtaaaatgcgacatttgtaatggt
catagatataatagagaaactttagagataaaatataaaggtaaatctattgctgatata
ttaatgatgactgttgaagatgcaatgcaattctttgaaaaaatcccattaatctatgaa
aaacttattaccttaaatgaagtgggactcggatacattaaaatcggtcaatcggccact
actctttccggaggggaagcacagcgtgttaagcttgctaaagagctatcaagacgttca
accggtaaaactctttacatactagatgagccgactacaggattgcacattgacgatatc
aataaattactaaaagtgttgcataagcttgttgatatgggaaatactgttttagttatt
gagcataatctagatgttataaaaacagctgattacattatcgatgttggtcctgagggc
ggtgataaaggcggtaagatagtagtacatggcacccctgccgatattgctgcatgtgac
gaaagccataccggtaggtatctaaagcagtatttgaaatga
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