Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_05220
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Entry
BA173_05220 CDS
T05695
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BA173_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ric03400
]
BA173_05220
DNA repair and recombination proteins [BR:
ric03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA173_05220
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA173_05220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
HH_RND_rel
AAA_7
Microtub_bd
T2SSE
tRNA_m1G_MT
SWI2_SNF2
AAA_22
DUF87
LarB_N
P-loop_SecA
UB2H
ZSWIM_N
AAA_5
TLN1-like_RS
Motif
Other DBs
NCBI-ProteinID:
ASX28204
LinkDB
All DBs
Position
complement(1031659..1033644)
Genome browser
AA seq
661 aa
AA seq
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MSNFSIISDYKPAGDQPKAIDEIIKGLNNKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYSEMKSIFPKNAVEYFVSYYDYYQPEAYIPKTDVFIEKDSSINEQIDL
MRHSATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMTVNLEPGKSYPRDKLLNDLVNLQY
ERNDIGFERGCFRVKGDNVDVFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLAKLDKA
IIYGNSHFVMPKETVNKAISEIEEELQKRIVFLKSQDKLLETQRINQRTQYDLEMLTETG
SCKGIENYSRFFTGRKAGEPPPTLFEYLPKDALLFVDESHVSVPQIRAMYNGDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPSLFELNETGGEVVELIIRPTGLLDP
ECIIKPATNQVEDLVGEIQSTIAKGFRVLVTTLTKKMAEDLTNYLQELKYKTSYLHSNVH
TLERIEILRDLRQGTIDILVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSEGRVILYADKMTKSIDKAISETMRRRTIQQEHNEKYGIIPKTINRTIHALAELEK
VDSKLDKKQTHNLFENPPKLKAHIDKLRKEMLKAASNLEFEQAAKLRDQLKTLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttttctattatatcagattataaaccagcgggtgaccagccaaaagcaatt
gatgaaattatcaaaggcttaaacaacaaaaaacgttctcagatgttgcttggtattaca
ggctcaggtaaaacctttactatggcaaatatcatagaaagaaccaaccgaccgacgctt
attatggcacataataaaacactagcagcacaaatctattccgaaatgaaatcgattttt
ccgaaaaatgcagttgaatattttgtctcatattatgattattaccaaccagaagcttat
attccgaaaaccgatgtttttatagaaaaagactcctcaattaacgagcagattgactta
atgaggcactcagctacaagatcgttattagagcgccgtgatgttatagtcgtgtcctct
gtttcttgcatttatggtcttggctcccctgatttatactatcaaatgacagtcaattta
gagcctggtaaaagctaccctcgtgataagctacttaatgatttagtgaatttacaatat
gagcgtaatgatattggttttgaacgtggttgctttcgggttaagggtgataatgttgat
gtttttccgtcacattatagcgataaggcttggcgtttatcattttttggtaatgaactc
gagtatattcacgaattcgatccgctaactggtgaaaagcttgctaaacttgataaagct
ataatatatggtaattctcacttcgtaatgccgaaagaaacagtaaataaagcaatatcg
gaaattgaagaggaattgcaaaaacgtatcgtattcttaaaatctcaagacaaattacta
gaaacacaaaggatcaatcaacgcactcaatacgatctggaaatgctaaccgaaacaggc
agctgtaaaggtatagaaaattactctcgattctttacaggtcgcaaagccggagagcca
ccgccaactttgttcgaatatttacctaaagatgcgttattatttgttgatgaaagccac
gtatctgtaccgcaaattagagctatgtataatggtgatagagcaagaaaagaagtgctg
gtagagcatggttttcgtctaccatccgctcttgataacagaccactaaaatttgaagaa
tgggagaagtttagaccgcaaactgttttcgtatcagcaacgccatcactttttgagtta
aatgaaactggcggcgaagttgtagagttaataattagacctactgggctgcttgatcca
gaatgtattattaagcctgctactaatcaagttgaggatttagtgggtgaaattcaaagc
acgattgccaaaggcttccgtgtattagttacaactcttaccaaaaaaatggcagaagat
ttaactaattatttacaggagcttaaatataaaacttcttatttgcattctaacgttcat
acattagagcgtatagaaatattaagggatttaagacaaggaacaattgatattctggtc
ggaattaacttgctacgtgagggtttagacattcccgaatgcggtttagttgccatactt
gatgctgacaaagaagggtttttgcgttcggaagtatcgctgatacaaacgatcggtaga
gctgcaagaaatagcgagggaagagttattctctatgccgataaaatgactaagtctatc
gacaaagctattagcgaaacgatgcgtagacggactattcagcaagaacataacgaaaaa
tacggcataattccaaaaaccatcaaccgcactatccatgctttagcagagcttgagaaa
gtagatagtaagcttgataaaaaacaaacccataatttatttgaaaatccacctaagcta
aaagctcatatcgataaactaagaaaagaaatgcttaaagctgcaagcaaccttgaattt
gaacaagcagcaaaacttcgtgatcaactaaaaactttagaagaggcggcattagaattg
agctaa
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