Roseovarius indicus: RIdsm_00003
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Entry
RIdsm_00003 CDS
T06222
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rid
Roseovarius indicus
Pathway
rid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RIdsm_00003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_00003 (recF)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RIdsm_00003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
ABC_tran
AAA_15
AAA_27
AAA_29
AAA_13
ATPase_2
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QEW24231
UniProt:
A0A0T5P6R1
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All DBs
Position
3254..4363
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AA seq
369 aa
AA seq
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MNLYLSRLTLSHYRSHKGAALALDARPVAIYGPNGAGKTNLLEAVSLFSPGRGLRRAAAQ
DMARRPESLGWKVTGHLHSLHQIHEVEIWSEEGQSRQVKIDGKAASQVALGRIARVLWLI
PSMDRLWIEGAEGRRRFLDRMTMSFEPAHADVSLAYEKAMRERNRLLKDQVRDGHWYVAL
ERQMAEAGVAIHRNRQKALAELQAAQQEAETAFPTAELELTMSEGEMPETEADFREALHE
SRFRDLAAGRTLVGPHRADLYGVYAAKGVPAKDCSTGEQKALLISLILANGRALAREFGA
PPILLLDEVAAHLDAGRRAALYDEVCALGAQAWMTGTGAELFEELGERAQLIEVTEAESI
SKISGKDAS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttacctttcccgcctgaccctgtctcactaccgctcgcacaagggggcggcg
ctggcgctggatgcgcggccggtggcgatctacgggccgaacggggcggggaagaccaac
cttctggaggcggtgtcgctgttttcgccgggccgcggtttgcggcgggcggcggcgcag
gacatggcgcggcggccggaaagccttgggtggaaggtcacggggcacctgcattccctg
catcagatccacgaggtcgagatctggtcggaggagggccagtcgcggcaggtgaagatc
gacggcaaggccgcgagccaggtggcgctggggcgcattgcgcgggtgctgtggctgatc
ccgtcgatggacaggctgtggatcgaaggggccgaggggcggcggcggtttctggaccgg
atgacgatgagcttcgagcccgcccatgccgatgtttcactggcctatgagaaggcgatg
cgggagcggaaccggctgctgaaggaccaggtgcgcgacgggcattggtatgtcgcgctg
gagcggcagatggcggaggccggggtggccattcaccggaaccgccagaaggcgctggcg
gagcttcaggcggcgcagcaggaggcggagacggcctttccgacggccgagctggagctg
accatgtcggagggggaaatgccggagacggaagcggattttcgcgaggcgctgcatgaa
agccggttccgcgacctggccgccgggcggacgttggtggggccgcacagggctgattta
tatggggtttatgccgccaagggggtgccggcgaaggactgttcgacgggggagcagaag
gcgcttttgatctcgctgatcctggccaacgggcgggccctggcaagggagttcggggcg
ccgccgatcctgctcttggacgaggtggcggcgcatctggatgcgggccggagggcggcg
ctctatgatgaggtctgtgcgctgggggcgcaggcgtggatgaccgggacgggggcggaa
ctgttcgaggaactgggcgagcgggcacagttgatcgaagtgacggaagcagaaagtatc
agcaaaatcagtgggaaagatgcgtcatga
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