Roseovarius indicus: RIdsm_00016
Help
Entry
RIdsm_00016 CDS
T06222
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rid
Roseovarius indicus
Pathway
rid00280
Valine, leucine and isoleucine degradation
rid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIdsm_00016 (lcfB_1)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
RIdsm_00016 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QEW24244
UniProt:
A0A0T5P6Q2
LinkDB
All DBs
Position
15622..17157
Genome browser
AA seq
511 aa
AA seq
DB search
MTCTIHDMFDRRCEADGEKVLFELKERPNVSYAATRATVRRLASVLTELGVGPGDRVAAQ
VKKSPEAVMLYLACLRAGAVFLPLNTGYTGAEIDYFLGDAEPRLFVCTPETLDAHLPRGS
AAMAVESLGTVGDGTLMARAAGATEQAQAVARAADDPAAILYTSGTTGRSKGAILSHGNL
ASNAVALNETWRFSENDRLIHALPIFHTHGLFVACNMALASGATLIFLTRFDPDEIIDEM
ADATVLMGVPTFYTRLLASPRLDPLATAAMRLFVSGSAPLQEQTHARFAERTGHTILERY
GMTETCMIASNPYDGERRVGAVGFPLPEVEVRVTDLETGDVVPGGETGAIEVRGPNVFQG
YWRMPEKTADEFRDDGFFITGDLGRMDADGYLHIVGRNKDLVITGGYNVYPKEIETMIDA
LPEVAESAVVGLPHPDFGEGVTAIVVPKDGAVIDKACVLDALSGTLARYKQPKTVMVVDA
LPRNVMGKVQKNELRGRFADLYAPARPTSDA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcacgatccatgacatgttcgaccgccgttgcgaggcagacggagagaaggtg
ctgttcgaactgaaagagcggccgaacgtgagctatgccgcaacgcgggccacggtgcgg
cggctggcgagcgtgctgaccgagctgggcgtcggcccgggggaccgtgtggccgcgcag
gtgaagaagagccccgaggcggtgatgctgtacctggcctgtcttcgggcgggggccgtg
tttctgccgctcaacacgggctatacgggggcggagatcgactatttcctaggggatgcc
gagccgcggctgttcgtgtgcacgccggagacgcttgacgcgcatttgccgcgcggctcg
gcggcgatggcggtggagagcctgggcacggttggcgacgggacgttgatggcgcgtgcc
gccggggcgacagagcaggcgcaggcggtggcgcgcgcggccgatgacccggccgcgatc
ctgtatacctcggggacgaccgggcgatcgaaaggtgcgatcctgagccatgggaacctt
gcgtcgaacgctgtcgcgctgaacgaaacctggcggttttccgagaatgaccggctgatc
cacgcgctgccgatctttcacacgcacggtcttttcgtggcgtgcaacatggcgcttgcg
agcggggcgacgctgattttcctgacgcggttcgaccccgacgagatcatcgacgagatg
gccgacgcgacggtgctgatgggggtgccgaccttttacacgcggcttctggcctcgccc
cggctcgacccgttggcgacggcggcgatgcggctgttcgtgtcgggctctgcgccgctt
caggagcagacgcacgcccggtttgccgagcgcacggggcacactatcctggaacgctat
gggatgaccgagacctgcatgatcgcctcgaacccctatgacggagagcgccgcgtcggg
gcagtgggtttcccgctgccggaggtggaggtgcgggtgaccgacctcgagaccggggac
gtggtgccggggggcgagaccggcgcgatcgaggtgcggggcccgaacgtgttccagggc
tattggcggatgccggagaaaaccgcagacgagtttcgcgacgacggttttttcatcacc
ggggacctcggccggatggatgccgacggctatctgcatattgtcggacgaaacaaggat
ctggtgatcaccggtgggtacaacgtttacccgaaggagatcgagacgatgatcgatgcc
ctgccggaggtggcggaatctgccgtcgtcggcttgccgcacccggatttcggcgaaggc
gtcacggccatcgtggtgccgaaggacggggccgtgatcgacaaggcgtgcgtgctggat
gcgctgtcgggcacgctggcaaggtacaagcagcccaagacggtgatggtggtcgacgcg
ctgccgcgtaacgtgatgggcaaggtgcagaagaacgaattgcggggccggtttgccgat
ctttatgcgcccgcccggcccacgagcgacgcgtag
DBGET
integrated database retrieval system
