Roseovarius indicus: RIdsm_00141
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Entry
RIdsm_00141 CDS
T06222
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rid
Roseovarius indicus
Pathway
rid03030
DNA replication
rid03430
Mismatch repair
rid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIdsm_00141 (dnaX_1)
03430 Mismatch repair
RIdsm_00141 (dnaX_1)
03440 Homologous recombination
RIdsm_00141 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rid03032
]
RIdsm_00141 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_00141 (dnaX_1)
Enzymes [BR:
rid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIdsm_00141 (dnaX_1)
DNA replication proteins [BR:
rid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIdsm_00141 (dnaX_1)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIdsm_00141 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_19
AAA_14
Rad17
AAA_18
AAA_assoc_2
Glyco_tranf_2_5
nSTAND3
AAA_24
DUF815
Motif
Other DBs
NCBI-ProteinID:
QEW24364
UniProt:
A0A0T5P6I5
LinkDB
All DBs
Position
complement(141121..142896)
Genome browser
AA seq
591 aa
AA seq
DB search
MTDADTQAAYQVLARKYRPETFADLVGQDAMVRTLKNAFKADRIAQAFIMTGIRGTGKTT
TARIIAKGMNCIGPDGQGGPTTDPCGVCEHCKAIMEGRHVDVLEMDAASRTGVGDIREII
DSVAYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLS
RCQRFDLRRIDPEQMIAMLRRIADAEKAEIADDALALITRAAEGSARDATSLLDQAISHG
AGETTAEQVRAMLGLADRGRVLDLFDLIMKGDAAGALGELSGQYAEGADPMAVLRDLAEI
AHWVSVVKITPEAAEDPTIGPDERDRGRTMAEALPMRVLTRMWQMLLKALEEVSQAPNSM
MAAEMAVIRMTHVAELPAPEDLVRRLQDGPPPQPPAGGPAPGGPGGGNAPAPTGHTSAYS
SGVSAQPGASGPSGQTTAVAAQSDTALAHYPTFDHVVELIRAHRDVKLLVEVETCVQLAA
YRPGRIEFCPTDDAPADLAARLGAALQRWTGNRWGVSVVSEGGKPTIAALRDAERIALED
EAKTHPLVQAVFSAFPGAKITGIRTPEEQQAEAQAEALPEVDEEWDPFEED
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgacacccaagccgcctaccaggttctggcccgcaaataccggcccgaa
accttcgccgatctcgtcggccaggatgcgatggtccgcaccctcaagaacgccttcaag
gccgaccgcatcgcccaggccttcatcatgaccggcatccgcggcacgggcaaaaccacc
accgcccggatcatcgccaagggcatgaactgcatcggcccggatggccagggcggcccg
acgaccgacccctgcggcgtctgcgagcattgcaaggcgatcatggaaggccgccatgtc
gacgtgctggaaatggacgcggcctcgcgcaccggcgtcggcgacatccgcgagatcatc
gacagcgtcgcctatcgcgcggcctcggcccgctataagatctacatcatcgacgaggtt
cacatgctctcgaccagcgccttcaacgcgctgctcaagacgctcgaggaaccgcccgcc
cacgtgaagttcatcttcgccacgaccgagatccgcaaggtcccggtcaccgtgctctcg
cgctgccagcgcttcgatctgcgccgcattgaccccgaacagatgatcgccatgctccgc
cgcatcgccgacgccgagaaggccgagatcgccgacgatgccctcgccctgatcacccgc
gccgcagaaggctcggcccgcgacgccacctcgctgctcgatcaggccatctcccacggc
gcgggcgaaaccaccgccgaacaggtccgcgccatgctggggctggccgaccgcggccgc
gtgctcgacctcttcgacctgatcatgaagggcgatgccgccggcgctttgggcgagctc
tccggccaatacgccgagggcgccgacccgatggcggtcctccgcgacctcgccgagatc
gcccactgggtcagcgtcgtgaagatcacccccgaggccgccgaagaccccaccatcggc
cccgacgaacgcgaccgcggccgcaccatggccgaggccttgccgatgcgcgtgctcacc
cgcatgtggcagatgctcctgaaggcgctggaagaggtctcgcaggcccccaattcgatg
atggccgccgaaatggccgtcatccgcatgacccatgttgccgagctgcccgcgcccgaa
gacctcgtgcgccggctgcaggacggcccgccgccccagccgcccgccggcggcccggcc
cccggcggccccggcggcggcaatgcccccgcccccaccggccatacttctgcctacagc
tccggcgtctccgcccagcccggcgcctccggcccctcgggccagaccactgccgtcgct
gcccaatccgacaccgcgctcgcccattaccccaccttcgaccacgtggtggaactcatc
cgcgcccatcgcgacgtcaagctgctggtcgaggtcgaaacctgcgtccagctcgccgcc
taccgccccggccggatcgaattctgccccaccgacgacgcccccgccgaccttgccgcg
cgcctcggcgcggccctgcaacgctggacaggcaaccgctggggcgtctcggtggtcagc
gaaggcggcaagcccaccatcgccgccctgcgcgacgccgagcgcatcgcgctcgaggac
gaggccaagacacacccgttggtccaggccgtcttctccgccttcccgggcgccaagatc
accggaatccgcacgcccgaagaacaacaggccgaggcccaggccgaagccctccccgaa
gtggacgaagaatgggatcccttcgaagaggactga
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