Roseovarius indicus: RIdsm_00301
Help
Entry
RIdsm_00301 CDS
T06222
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rid
Roseovarius indicus
Pathway
rid03420
Nucleotide excision repair
rid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RIdsm_00301 (uvrD)
03430 Mismatch repair
RIdsm_00301 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_00301 (uvrD)
Enzymes [BR:
rid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RIdsm_00301 (uvrD)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIdsm_00301 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RIdsm_00301 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEW24521
UniProt:
A0A0T5P9N3
LinkDB
All DBs
Position
305459..307804
Genome browser
AA seq
781 aa
AA seq
DB search
MSSFDETDAFEGASLAARAMAARPAPYLDDLNPAQREAVEALDGPVLMLAGAGTGKTKAL
TTRLVHLLNTGRARPNEILSVTFTNKAAREMKLRVGRLLGETVEGMPWLGTFHSICVKLL
RRHAELVDLKSNFTILDTDDQLRLLKQLVQAAGIDDKRWPARQLAGVIDHWKNRAWTPDK
VPAGEASAYDGKGVALYRQYQERLRELNAVDFGDLLLHMVVIFQNHEDVLKQYQRWFRYI
LVDEYQDTNVAQYMWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGATVV
RLEQNYRSTPHILAAAGGVISGNKGRLGKELWTEVDEGEKVRLIGHWDGEEEARWIGEEI
ESMQGGTRGMRPFSLDEMAILVRASHQMRAFEDRFLTIGMPYRVIGGPRFYERMEIRDAM
AYFRLVVSPADDLAFERIVNTPKRGLGDKAQQKIQVAARQNGVSLLEGAAILLEEKGLSG
KGAAELGRLVEGLRRWGRMAGDPSMSHIELAEVVLDESGYTEMWQNDKTPEAPGRLENLK
ELVKALEGFENLQGFLEHVSLIMDNESEEQGEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGLKGVEEERRLAYVGITRAEELCTISFAGNRRVYGQWQSQMPSRFIDELPE
DHVEVLTPPGLYGGGYGSAGLGGSGIESRAAEADGYNSPGWRRLQARAGQRPLSQPRESK
ASVIDAQAVSSHTVGERVFHQKFGYGAILGIEGDKLEIDFEKAGVKKVVAKFVSGADDIP
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgagaccgacgccttcgagggcgcttcgctggccgcgcgggcgatg
gcggcccggcctgcgccgtacctggatgatctgaaccctgcgcagcgtgaagcggtggag
gcgctggatggcccggtgctgatgctggcgggcgccgggacgggcaagaccaaggcgctg
acgacgcggctggtgcatctgctgaataccgggcgggcgcgaccgaacgagatcctgtcg
gtgaccttcaccaacaaggcggcgcgggagatgaagctgcgcgtgggccggttgctgggc
gagacggtggaggggatgccgtggctgggcacgttccactcgatctgcgtgaagctgctg
cggcggcatgcggaactggtggatttgaagtcgaacttcacgattctcgatacggatgac
cagttgcggctgctcaagcagctggtgcaggccgcggggatcgacgacaagcgctggccg
gcaaggcagctggccggggtgatcgaccactggaagaaccgggcctggacgcccgacaag
gtgcccgccggggaggcctcggcctatgatgggaagggcgtggcgctttaccggcagtac
caggagcggctcagggagctgaacgcggtcgatttcggcgacctgctgttgcatatggtg
gtgatctttcagaaccatgaggatgtgctgaagcagtatcagcggtggttccggtacatc
ctcgtggacgagtaccaggataccaacgtggcgcagtatatgtggctgcggctcttggcc
ggggggcacaagaatatctgctgtgtgggcgatgacgatcagtcgatctatggctggcgc
ggggccgaggtgggcaacatcctgcggttcgagaaggattttcccggtgccaccgtggtg
cggctggaacagaattaccgctcgacgccgcatatcctggccgctgcggggggcgtgatt
tccggcaacaaggggcggctgggcaaggagctgtggaccgaggtcgacgagggcgagaag
gttcggctgatcggccattgggacggcgaggaagaggcgcgctggatcggcgaggagatc
gagtcgatgcagggcggaacgcgggggatgcggccgttttcgctggacgagatggcgatc
ctggtgcgggcgtcgcaccagatgcgggccttcgaggaccggttcctgacgatcgggatg
ccctatcgggtgatcggcgggccgcgcttctacgagcggatggagatccgcgatgcgatg
gcctatttccggctggtggtgagcccggcggacgatttggcgttcgagcggatcgtgaac
acgccgaagcgggggctgggcgacaaggcgcagcagaagatccaggtggcggcaaggcag
aatggcgtgtcgctgctggaaggcgcggcgatcctgctggaggagaagggactttccggc
aagggggcggcggagctgggccggctggtcgaaggcttgcggcgctggggccggatggcc
ggtgatccgagcatgagccatatcgagctggccgaggtggtgctcgacgagtccggctat
accgagatgtggcagaacgacaagacgccggaggcgccggggcggctggagaacctcaag
gagctggtgaaggcgctggaggggttcgagaacctgcaggggttcctggagcatgtcagc
cttatcatggataacgagagcgaggagcagggcgagaaggtgtcgatcatgacactgcat
gccgccaagggcttggagtttccggccgtgttcctgccgggctgggaggacgggttgttc
ccctcgcagcgctcgatggatgaaagcgggttgaagggcgtcgaggaggagcggcggctg
gcctatgtggggatcacgcgggccgaggagctgtgcacgatttcctttgcggggaaccgg
cgggtctacgggcagtggcagagccagatgccgtcgcgctttatcgacgagttgccggag
gatcatgtggaggtgctgacgccgccgggcttgtatggcgggggctatggctcggccggg
ctgggcggcagcgggatcgagtcgcgggcggcggaggcggacgggtataactcgcccggc
tggcggcggttgcaggcgcgggccgggcagcggccgctgagccagccgcgggaatcgaag
gcgagcgtgatcgacgcgcaggcggtgagcagccacacggtgggcgagcgggtgtttcac
cagaagttcgggtatggggcaattctggggatcgagggcgacaagctggagatcgatttc
gagaaggcgggggtgaagaaggtcgtcgccaagttcgtcagcggggcggacgatattccg
ttttag
DBGET
integrated database retrieval system
