Roseovarius indicus: RIdsm_00317
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Entry
RIdsm_00317 CDS
T06222
Symbol
amiC_1
Name
(GenBank) Aliphatic amidase expression-regulating protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_00317 (amiC_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00317 (amiC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00317 (amiC_1)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_00317 (amiC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
QEW24537
UniProt:
A0A0T5PA37
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All DBs
Position
complement(321486..322772)
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AA seq
428 aa
AA seq
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MTKLIKGTTRRGALKTLAGGAAGAASLPLWARFADAQTSEPIKVGFQVHRTGIGAAYGRW
YDRTTQAAAKLINDAGGINGRMVEIVAEDDGTDPKRGAEVVEKFANQHGCDVGFGTLFSH
VVIGSAPRAGELKLPYFVVSEGHHVASGMLNRYTLQPGITDVKSQVQAMAPYVSENLGKK
VTMVFPDFAFGHDHRDFFTSAIEAQGGEVLEHIAIPPSETSFTKYFPKIPRETEVLYHVM
VGPAVLTFVKELGEFFGPSRPEMFGFIDSLEAVDLASPGLEYLNDTYFWEGNPRHAQEDQ
SEFDKFFREQVGVDERGASVSDATDVSTYAHMFGCWETLYTLKAGMEACDYKGPDDRAAL
IEAVEAMTEMPHSNEHPQGAKQFNGKTHQVFGHQYISRVEDGFLKRVHTTSIEDTFYPDE
VDYTTQSF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaactcatcaagggcacgacgcgccggggcgcattgaagacactggcgggtggc
gcggcgggcgcggcaagcctgccgctctgggcgcgttttgccgacgcgcagacctccgag
ccgatcaaggtgggcttccaggtccaccgcaccggcatcggcgccgcctatggccgctgg
tacgaccgcaccacccaggccgccgccaagctgatcaacgacgcgggcggcatcaacggc
cgcatggtcgagatcgtcgccgaggatgacggcaccgaccccaagcgcggcgccgaggtg
gtcgagaaattcgccaaccagcatggctgcgacgtgggcttcggcacgctgttcagccac
gtggtgatcggctcggccccgcgggcgggcgagctgaagctgccctatttcgtggtctcg
gaagggcatcacgtggcctcgggcatgctcaaccgctataccctgcagcccggcatcacc
gacgtgaaaagccaggtgcaggcgatggcgccctacgtgtcggagaacctcggcaagaag
gtcaccatggtgttccccgatttcgccttcggccacgatcaccgcgatttcttcacctcg
gcgatcgaggcgcagggcggcgaggtgctcgagcatatcgccatcccgccgtccgagacg
tcgttcaccaagtatttccccaagatcccgcgcgagacggaagtgctgtatcacgtcatg
gtggggccggccgttctgaccttcgtgaaggagctgggcgagttcttcgggccgtcgcgg
ccggaaatgttcggcttcatcgacagcctcgaggcggtcgacctggccagccccggcctc
gaatacctcaacgacacctacttctgggagggcaacccgcgccacgcccaggaagaccag
tcggagttcgacaagttcttccgcgagcaggtgggcgtcgacgaacgcggcgcctcggtc
agcgatgccaccgacgtgtcgacctatgcccacatgttcggctgctgggagacgctctac
acgctcaaggccgggatggaagcctgtgactacaagggcccggatgaccgcgccgcgctg
atcgaggcggtcgaggcgatgaccgagatgccacactcgaacgagcacccgcagggggcc
aagcagttcaacggcaagacccaccaggtgttcggccaccagtatatcagccgggtcgag
gacgggttcctcaagcgcgtgcacaccacctcgatcgaggacacgttctaccccgacgag
gtggattacacgacccagtcgttctga
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