Roseovarius indicus: RIdsm_00403
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Entry
RIdsm_00403 CDS
T06222
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rid
Roseovarius indicus
Pathway
rid00541
Biosynthesis of various nucleotide sugars
rid01100
Metabolic pathways
rid01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RIdsm_00403 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rid01005
]
RIdsm_00403 (kdsA)
Enzymes [BR:
rid01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RIdsm_00403 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rid01005
]
Lipid A
RIdsm_00403 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QEW24622
UniProt:
A0A0T5P951
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All DBs
Position
complement(405706..406539)
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AA seq
277 aa
AA seq
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MTHVTISDLTIGNDRPLTVIAGPCQLESTDHAQMIAGKMAEACKAAGAQFIFKGSFDKAN
RSSMSGKRGLGIDEGLKVMQSVKDTLGLPVLTDVHLPDQCAPVAAVCDVLQIPAFLCRQT
DLLLAAGETGAAINVKKGQFLAPWDMAGVISKLESTGNTRLMLTERGTTFGYNALVADMR
SLPQMAQTGYPVVMDATHSVQQPGGLGGSSGGQREFAPVMARAAVAIGVAAVFIETHEDP
DTAPSDGPNMIPLAQMPALISTLMQFDRLAKENPLSL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgtcacaatttccgacctcacgatcggcaatgaccgccccctgacggtcatc
gccggcccttgtcagcttgaaagcacagaccacgcccagatgatcgccgggaagatggcc
gaagcctgcaaggccgccggcgcccagttcatcttcaagggctccttcgacaaggccaac
cgctcctccatgtcgggcaagcgcgggcttggtatcgacgaggggctgaaggtcatgcaa
tcggtcaaggacacgctcggcctgccggtgctgaccgacgtgcacctgcccgaccaatgc
gcccccgtggcggcggtctgcgacgtgctgcaaatcccggccttcctctgccgccagacc
gacctgctgctcgccgccggcgaaaccggcgcggcgatcaacgtcaagaaggggcagttc
cttgccccgtgggacatggccggtgtcatctccaagctggaaagcaccggcaacacccgg
cttatgctcaccgaacgcggcaccaccttcggctacaacgcgcttgtcgccgacatgcgc
tcgctcccgcagatggcgcagaccggctacccggtggtgatggacgccacccattccgtg
caacagccaggcggcctcggtggctcctccggcggacagcgcgaattcgcgccggtcatg
gcgcgggcggcggttgcaatcggggtggccgccgtgttcatagaaacccatgaagacccc
gacaccgccccctccgacgggccgaacatgatccccctcgcgcagatgcctgcgctgatt
tccacgctcatgcaattcgacaggctggccaaggaaaacccgctcagcctctga
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