KEGG   Roseovarius indicus: RIdsm_00474
Entry
RIdsm_00474       CDS       T06222                                 
Name
(GenBank) uracil-DNA glycosylase, family 4
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rid  Roseovarius indicus
Pathway
rid03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RIdsm_00474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rid03400]
    RIdsm_00474
Enzymes [BR:rid01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     RIdsm_00474
DNA repair and recombination proteins [BR:rid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RIdsm_00474
SSDB
Motif
Pfam: UDG Fas1-AflB-like_hel
Other DBs
NCBI-ProteinID: QEW24691
UniProt: A0A5P3A6L6
LinkDB
Position
complement(482250..483074)
AA seq 274 aa
MRYAAPVESELSYHAARALLEWHIELGATEAIGDLPVNRYEIPAAALAPKPAPTPDAAAA
RATPPLPQAAPEVDPVDVARAAAAGAADLKALEAAMADYPHCDLKMGARNLVFFDGNPAA
RVMIIGEAPGRDEDMQGKPFVGRAGQLLDRMLAAIGMARHSQDPAKSVYITNVLPWRPPQ
NRDPKPEEIAMLLPFLQRHVELVDPELVVLMGNTSCQAGLGRRGITRLRGTWTQAYGRPA
MPMFHPAGLLRNPHNKRFAWADLLEVQARLEGET
NT seq 825 nt   +upstreamnt  +downstreamnt
ttgcgatacgctgcgcccgtggaatcggagctttcatatcacgccgcccgcgccctgctg
gaatggcatatcgaactcggcgcgaccgaggcgatcggcgatctgccggtcaaccgctat
gaaatccccgctgcggcgctggcgcccaagcctgcgcccacaccggacgccgcggcggcg
cgcgccacgccgccgttgccgcaagccgcgcccgaggtcgacccggtcgacgtggcccgc
gccgccgccgccggtgccgccgacctcaaggcgctcgaagccgcgatggccgattatccc
cattgcgacctcaagatgggcgcccgaaacctcgtcttcttcgacggcaaccccgccgcc
cgcgtgatgatcatcggcgaggcgcccgggcgcgacgaggacatgcagggcaagcccttc
gtcgggcgtgcggggcagttgttggaccggatgctggcggcgatcggcatggcccgccat
tcgcaagatccggccaagtcagtttatatcaccaacgtcctgccgtggcgcccgccgcag
aaccgcgacccgaaaccggaagagatcgccatgctgctgcccttcctgcagcgccatgtc
gaactggtcgatccggagctggtcgtgctgatgggcaatacaagctgtcaggcggggctg
ggccggcggggtatcacccggctgcgcggcacctggacgcaagcctatggccgccccgcc
atgccgatgttccacccggcgggtcttttgcgcaatccgcacaacaagcgctttgcctgg
gccgatctgctggaagtgcaagcgcggctcgagggagagacatga

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