Roseovarius indicus: RIdsm_00491
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Entry
RIdsm_00491 CDS
T06222
Symbol
oprF_2
Name
(GenBank) Root adhesin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00491 (oprF_2)
Transporters [BR:
rid02000
]
Other transporters
Pores ion channels [TC:
1
]
RIdsm_00491 (oprF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
Motif
Other DBs
NCBI-ProteinID:
QEW24708
UniProt:
A0A0T5NZ83
LinkDB
All DBs
Position
497293..499305
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AA seq
670 aa
AA seq
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MRLSSVFAIGGVFLTAAILCLVCARFAVSVVEDTSRHSVRNTLDENGMTWTEVDANGLHV
FLAGTAPSEATRFKALSIAGSVVDAARVIDQMLVQDTGQIAAPRFSMEILRNDSGVSLIG
LVPASMDRDGFVEQVEAAVESEPVADFLESADYPAPETWEAATAYALRSLKDLKRTKISL
DAEQISVTAMTESAAVKADMETRLARRLPDGVKLALNISAPRPVITPFTLRFVIGEEGAR
FDACSADTEAARERIVKAARAAGLTGKANCLIGLGVPSPNWAVAAEQAIKAVDDLGGGVV
TFSDADISLVALEGTPQGEFDNVVGTLESALPEVFALHAVLPEPPDETTPETPEFTATLS
PEGMVQIRGRIATAAERKLVESFARARFTSDGVHMSARVAEGLPEGWTFKVLTALDALSY
LSNGVVRVSPDEMQITGQTGQADAGSIISGMLSEKLGEGAQYEIDVRYREELDPVASLPT
PEECESRIARIQETRKINFEPGSANIDASGSEIMDDIAEILKQCGEITMEIGGHTDSQGR
EVMNQQLSQARAQTVLNELRMRRVLTASITAVGYGETQPIEDNGTEEGREANRRIEFRVI
KPVEIVEEQTTLESLEGSSEEQSDTEEADGQADEGAEGSGDEAGEAEEGAADAADSADGE
TQEDTADEQN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttcatcggtattcgctatcggcggagtgttcctgacagcggcgatcctgtgc
cttgtctgcgcacgattcgccgtttcggtcgtcgaggacacctcgcgccattccgtccgc
aacacgcttgacgaaaacggcatgacgtggacggaggtcgacgccaacggcctgcacgtc
ttccttgccggcaccgcgccgtcggaggcgacgcggttcaaggcgctgtcgatcgccggg
tcggtggtggatgccgcgcgggtgatcgaccagatgctggtgcaggataccggccagatc
gcggcgccacgcttttccatggagatcctgcggaatgacagcggcgtgtcgctgatcggg
ctggtgcccgcctcgatggaccgcgacgggttcgtcgagcaggtcgaagccgcggtggaa
agcgagccggtggccgatttcctcgaatccgcggattacccggcgcccgagacctgggag
gcggcgacggcctatgcgctgcggtcgctgaaggatctcaagcggacgaagatatcgctc
gatgccgagcagatttcggtgacggcgatgaccgagagcgcggcggtgaaggcggatatg
gagacgcggctggcgcggcggctgccggatggcgtgaagctggcgctgaacatctcggcg
ccgcggccggtgatcacgccctttaccctacggttcgtgatcggcgaggagggcgcgcgg
ttcgacgcctgttccgccgataccgaggccgcgcgggagcggatcgtcaaggcggcgcgc
gcggccgggctgacgggcaaggcgaactgcctgatcgggcttggggtgccgtcgcccaac
tgggccgtggccgccgagcaggcgatcaaggcggtggatgaccttggcggcggggtggtg
acgttctcggacgccgatatctcgctggtggcgctggagggcacgccgcagggcgagttc
gacaacgtggtgggcacgctggaaagcgcgctgccggaggtgttcgcgctgcatgccgtg
ctgcccgagccgccggacgagacgacgcccgagacgccggaattcaccgcgacgctgtcg
cccgaggggatggttcagatccggggccggattgcgaccgccgccgagcgcaagctggtg
gaaagctttgcgcgggccaggttcacctcggacggggtgcatatgagcgcgcgggtggcc
gaggggctgcccgaggggtggaccttcaaggtgctaaccgcgctcgatgcgctgtcgtac
ctgtcgaacggtgtggtgcgggtgtcgccggacgagatgcagatcaccggccagacgggc
caggccgatgccgggtcgatcatttcgggcatgttgtcggagaagctgggcgagggcgcg
cagtacgagatcgacgtgcgctatcgcgaggagctggacccggtggcgagcctgccgacg
cccgaggaatgcgagagccgcatcgcgcggatccaggagacgcggaagatcaacttcgag
ccgggctcggccaatatcgacgcgagcggctcggagatcatggacgacatcgccgagatc
ctgaagcaatgcggcgagatcaccatggagatcggcggccacaccgacagccagggccgc
gaggtgatgaaccagcagctgagccaggcgcgggcgcagacggttctgaacgaattgcgg
atgcgccgggtgctgaccgcgtcgatcaccgccgtggggtatggcgagacccagcccatc
gaggataacggcacggaagagggccgggaggcaaaccggcggatcgaattccgggtgatc
aagcccgtcgagatcgtcgaagagcaaacaacgcttgaatctctggaaggatcgtcagaa
gaacagtcggacacggaagaagccgacgggcaggctgacgaaggcgccgagggctcgggg
gacgaggccggcgaggcggaagagggggctgcggacgctgccgacagcgcggacggcgag
acgcaggaagacacggcggatgaacagaattga
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