Roseovarius indicus: RIdsm_00616
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Entry
RIdsm_00616 CDS
T06222
Symbol
livF_1
Name
(GenBank) LIV-I protein F
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_00616 (livF_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00616 (livF_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00616 (livF_1)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_00616 (livF_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_22
AAA_29
AAA
AAA_27
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QEW24832
UniProt:
A0A0T5P256
LinkDB
All DBs
Position
complement(606878..607576)
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AA seq
232 aa
AA seq
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MLELEGIETGYGETRVVHGLDLTVREGTVHALLGRNGVGKSTTLKSVIGQLPVTVGTVRL
AGQQISGRLPHDIARLGVAYVPETRDIFGALTVRENLELAGRLAGPGADWTVDRIVAFFP
NLAERLNNGGHELSGGEQQMLAVGRALMASPRILMLDEPTEGLAPIIIQQIFGKLKELKA
SGLTILLVEQNLNFALGLADDISLMGRGQIVWRGDAAALKADDQAHARWLGV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagctggaaggcatcgagaccggctatggcgagacccgcgtggtgcacgggctc
gacctgacggtgcgcgagggcacggtgcacgcgcttctgggccgcaacggggtgggcaag
tcgaccacgctgaaatcggtaatcgggcagttgccggtgacggtcggcaccgtgcggctg
gccggtcagcagatttccggccggttgccccatgacatcgcccggctgggcgtggcctat
gtgcccgagacgcgggatatcttcggcgccctgacggtgcgcgagaacctcgaactcgcc
ggccggctggcggggcccggggccgactggacggtcgacaggatcgtggcgttcttcccc
aacctggccgagcggctgaacaatggcgggcacgagctgtcgggcggcgagcagcagatg
ctggcggtgggccgcgccctgatggcctcgccgcgcatcctgatgctcgacgagccgaca
gaagggctggccccgatcatcatccagcagatcttcggcaagctgaaggagctgaaggca
tcgggtctgaccatcctgctggtcgagcagaacctgaacttcgcccttggcctggccgac
gatatcagcctgatgggccgcggccagatcgtctggcgcggcgatgcggctgcgctgaag
gccgacgaccaagcgcatgcccgctggctgggggtctga
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