Roseovarius indicus: RIdsm_00631
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Entry
RIdsm_00631 CDS
T06222
Symbol
fadB_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rid
Roseovarius indicus
Pathway
rid00071
Fatty acid degradation
rid00362
Benzoate degradation
rid00650
Butanoate metabolism
rid01100
Metabolic pathways
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
rid01212
Fatty acid metabolism
Module
rid_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RIdsm_00631 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
RIdsm_00631 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RIdsm_00631 (fadB_1)
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RIdsm_00631 (fadB_1)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
UBA_RAD5A
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QEW24847
UniProt:
A0A0T5P252
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All DBs
Position
621214..623274
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AA seq
686 aa
AA seq
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MVVHTRREGATGYVELDTPPVNAMGHEFRQGLLDAVDWVEAEGLERVIVSGRGRLFSAGG
DAREFDDMLPEPSLPDILNRIEQGPVPWIAAAHGAALGGGLELMLACRYRVAAPGTQLGL
PEVTLGVVPGAGGTQRLPRLVGLERALALIPTGRAIPAEEARAIGLIDEIDADPVAFAEL
ANPEWLAMKVPVSELNSGELPAETFEAARRATAVTMPGQTAPQRAIDLIEASQHMPIEAG
LIQERAAFLETRRSAQAKALRHVFFAERAARRPARMTHVTPPGAGPVAVIGGAATDTDIA
YALLLAGLDVTFIDPDADGLARAAETFDRHLGGAVSRGLMSEDRAGTLRAALTLGTDLAT
ATAPLVIEAVPERMEAKTAVFAALQTILPPDAVLATTTACLDLDAMAQALDDPTRLVGLH
FSAPAHETKLLEIVPGARTSDTALAMAFHLAGRLRKTPVVSGPGDGLICNRLLGRYVEAA
DTVLMDGSTPWEVDEAMVEFGFPTGPFEAQDLSGLDLAHAARRRQDATRDPNRRYIPVAD
RMVELGKLGRKTGAGWYRYPGGGGKVDDPIVADLALEEARYAGVERCDYKPEEIRHRLLL
ALINEAADILYEGIARSATDIDLVSIFGLGFPRWRGGLMFHADTLGPGKVLEGLKELSKE
DPVVWKPSPMIEDCAARGIRFGKWRR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggttgtccatacgcgccgggagggggcgaccgggtatgttgagctcgacaccccgccc
gtcaacgccatggggcacgaattccggcaaggtcttctggacgcggtcgactgggtcgag
gcagagggattggaacgtgtcatcgtctccggccgggggcggcttttctcggccgggggt
gatgcccgcgaattcgacgacatgctgcccgagcccagcctgcccgacatcctcaaccga
atcgagcagggcccggtaccgtggatcgccgcggcccatggcgcggcgctgggcggcggg
ctggagctgatgctcgcctgccgctaccgcgtcgccgcgccgggcacgcagctgggcctg
cccgaggtgacgctcggcgtcgtgccgggcgcgggcggcacgcagcgcctgccgcgtctc
gtcggcctcgagcgggcgctcgccctgatccccacgggccgcgccattcccgccgaagag
gcccgcgccatcggcctgatcgacgagatcgacgccgacccggtggcgttcgccgagctg
gccaaccccgaatggctggccatgaaggtcccggtgagcgagctcaactctggcgagctt
ccggccgaaaccttcgaggccgcccgccgcgccaccgccgtaaccatgccgggccagacc
gccccgcagcgcgccatcgacctgatcgaggcctcgcagcacatgcccatcgaggccggg
ctgatccaggaacgcgcggccttcctcgaaacccgcaggtcggcccaggccaaggccctg
cgccacgtcttctttgccgaacgcgcggccaggcggccggcgcggatgacgcatgtcacc
ccgcccggcgccggccccgtcgccgtgatcggcggcgccgccaccgataccgacatcgcc
tatgcgctcctgctggcggggctcgacgtgacgttcatcgaccccgatgccgatggcctg
gcccgggccgccgaaaccttcgaccgccatctgggcggcgccgtgtcccgcgggctcatg
tccgaagacagggccggcacgctgcgcgccgcgcttaccctcggcaccgatcttgccacc
gccaccgcccccctcgtgatcgaggcggtgcccgagcggatggaggcgaaaaccgccgtc
ttcgcagcgctgcaaaccatcctgccgcccgacgccgtcctcgccacgacgaccgcctgc
ctcgacctcgacgccatggcgcaggcgctcgacgaccccacccgccttgtcggcctgcat
ttcagcgccccggcgcatgaaacgaagctgctcgagatcgtcccgggcgcccgaacctcc
gacaccgcgctggccatggcgttccacctcgctgggcgcctgcgcaagacgcccgtcgtg
tcggggccgggcgacggcctgatctgcaaccgcctcctcggccgctatgtcgaggcggcc
gataccgtgctgatggatggctccaccccgtgggaggtggacgaggcgatggtcgagttc
ggcttccccacgggccccttcgaagcgcaggacctctcgggcctcgacctggcccatgcc
gcccgccgccgtcaggatgccacccgcgacccgaaccgccgctacatccccgtggccgac
cgcatggtcgagctgggtaagctcggccgcaagaccggggcagggtggtaccgttacccg
ggcgggggcggcaaggtcgacgacccgatcgtcgccgacctcgcgttggaggaagcgcgc
tatgccggggtcgagcgctgcgactacaaaccggaggagatccggcacaggctgctgctg
gccctgatcaacgaagcggccgatatcctgtacgagggcatcgccagatcggccaccgat
atcgacctcgtcagcatcttcgggctcggctttccccgctggcgcggcgggctgatgttc
cacgccgacacgctggggccgggcaaggtgctggaggggctgaaagagctgtcgaaggaa
gacccggtcgtgtggaaacccagcccgatgatcgaggattgtgccgcccgggggattcgc
ttcgggaaatggcggcggtga
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