Roseovarius indicus: RIdsm_00637
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Entry
RIdsm_00637 CDS
T06222
Name
(GenBank) Bacterial extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00637
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIdsm_00637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Hemocyanin_C
Motif
Other DBs
NCBI-ProteinID:
QEW24853
UniProt:
A0A0T5P239
LinkDB
All DBs
Position
complement(629475..630584)
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AA seq
369 aa
AA seq
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MQDKQFMKETLLQSAHAYKDGRLDRRTFLALCGASGVAMSAVMAGDAKAAADHIVMWNWG
GISEECHGSAIGEPFEEKTGMGMKFDTSGPLEGKIREMVDSGNVTADVCDADLFNAVSLG
PTGHLEPIDYDIVSKDRTLPQYALEYGVSIILYGYAFVYDTEVYGDNPPKDWADFFDTEN
FPGTRALYKWANGSLEGALMADGVAGDELYPLDMERALNKVKSIKDDSIYWGSGSEVHSM
CISGEASMAIIWQNRGKSIEEDTEGRYKLVNNQAMAMPGAYIVPKGNPAGREAVMQFIAT
AQEVPSQLMILDCLGMTPSNPEAFSEIPEEQQPYAITSEQNIDKIVYNDPVWWGENGSEA
VNAFLEAIS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaagcaattcatgaaggagacgcttcttcagagcgcccatgcctacaaggac
ggccggttggaccggcgcaccttcctcgcgctctgcggcgcgtcgggcgtggcgatgtcg
gcggtgatggccggcgatgccaaggccgccgccgatcatatcgtgatgtggaactggggc
gggatttccgaggaatgccacggctcggccatcggtgagcccttcgaggaaaagaccggg
atggggatgaagttcgacacgtcgggcccgctggaaggcaagatccgcgagatggtcgac
agcggcaacgtgacggcggatgtctgcgatgccgacctgttcaacgccgtgtcgcttggg
ccgacggggcatcttgagccgatcgattacgatatcgtcagcaaggacaggaccctgccg
caatatgcgctggaatacggggtgtcgatcatcctttacggctatgccttcgtctatgac
accgaggtttacggggacaatccgccgaaggactgggcggatttcttcgacacggaaaac
ttccccggcacgcgggcgctttacaagtgggcgaacgggtcgctggaaggggcgttgatg
gccgacggggtggccggtgacgagctttacccgctcgacatggagcgggcgctcaacaag
gtgaagtcgatcaaggatgacagcatctattggggctcggggtccgaggtgcattcgatg
tgcatcagcggcgaggcgtcgatggcgatcatctggcagaaccgcggcaagagcatcgag
gaggataccgagggccgctacaagctggtgaacaaccaggcgatggcgatgcccggcgcg
tatatcgtgcccaagggcaacccggcggggcgcgaggcggtgatgcagttcatcgccacc
gcgcaggaagtgccgtcgcagctgatgatcctcgactgtctcggcatgacgccctcgaac
cccgaggcgttctcggagatcccggaagagcagcagccctatgccatcacgtccgagcag
aacatcgacaagatcgtctataacgatccggtctggtggggcgagaatggcagcgaggcg
gtgaacgccttcctcgaagcgatcagctag
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