Roseovarius indicus: RIdsm_00712
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Entry
RIdsm_00712 CDS
T06222
Symbol
oppD_1
Name
(GenBank) Stage 0 sporulation protein KD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
rid
Roseovarius indicus
Pathway
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00712 (oppD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00712 (oppD_1)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RIdsm_00712 (oppD_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
oligo_HPY
OppC_N
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QEW24928
UniProt:
A0A0T5P4T9
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Position
complement(731055..732917)
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AA seq
620 aa
AA seq
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MAFLKLLFRNKLAAMGAVVLAFIVVLVILTPILPLQNPDITATADRFKRPFTDGHLLGTD
HLGRDLLSRLLWGTRLSLAVGVAAAVLAAFFGSAIGITAGYFGGKVDNIFMRGVDMLMAF
PYILLALAIVAALGPGLMNALIAVAAVNVPFFARNIRGITVGLAGREFIDAARLAGMGHA
RIILTELLPNVLPVIIIAMSTTVGWMILETAGLSFLGLGSQPPQADLGSMLGEARSALIS
HPHTSVVPGIMIFLIVMSINLLGDGVRDALDPRLRSGALSRPLPTTLVNRKGNIPAATDD
LLAIQELETQFHVGKRIYKAVGGVSLAVKPGECLGVIGESGSGKSVTALSVMGLVASPPG
VITGGAVRFQGEDLVGAPYETLRQKRGDRVAYIFQDPLSTLHPLYKVGQQLAEAIQSHHR
VSNAEARSRAIQLLKDVRIPNAESRVDNYPHEMSGGMRQRVGIAMSLANEPDVIIADEPT
TALDVTVQAQILSLLDDLRRERGLAIIFITHDFGVVAQLCDRMAVMYAGRIVEEGPTGSV
LSHPLHPYTKRLIACVPELGEGRREMAAIPGLPPVVDDLPPGCAFAPRCEKAREECRQGD
ITLDRSGARAVRCLYPEETL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggccttcctcaagctgctcttccgcaacaagctggcggcaatgggggcggtcgtgctg
gcattcatcgtggtgctggtgatcctcacccccatcctgccgctgcagaaccccgacatc
accgccaccgccgaccgcttcaagcggcccttcaccgatgggcacctgctgggcaccgat
cacctcggccgcgacctcctcagccgcctgctctggggcacccggctttccctcgccgtg
ggcgtggcggccgccgtgctggcggccttcttcggctcggccatcggcatcaccgccggc
tatttcggcggcaaggtcgacaacatcttcatgcgcggcgtcgacatgctgatggccttt
ccctacatcctgctggcgctggccatcgtcgcggccctcggccccggcctgatgaacgcg
ctcatcgccgtggccgccgtcaacgtccccttcttcgcccggaacatccgcggcatcaca
gtgggcctcgcggggcgcgaattcatcgacgccgcccgcctcgccggcatgggtcacgcc
cgcatcatcctgaccgagcttctgcccaacgtcctgccggtcatcatcatcgccatgtcc
accaccgtcggctggatgatccttgaaaccgccggcctctccttccttggcctcggctcg
cagccgccgcaggccgatctcggctccatgctgggcgaggcgcgctcggccctcatctcc
cacccgcacacctcggtcgtgccggggatcatgatcttcctgatcgtcatgtccatcaac
ctcctcggcgacggggtgcgcgacgcgctcgacccgcgcctgcgctcgggcgccctgtcg
cgcccgctgcccacgacgctcgtgaaccgcaagggcaacatcccggcggccaccgacgac
ctcctcgccatccaggagctcgaaacccagttccacgtgggcaagcgcatctacaaggcc
gtcggcggcgtttccctcgccgtgaaaccgggcgaatgtctcggcgtcatcggcgaatcc
ggctcgggcaagtcggtcacggcgctgtcggtcatgggtctggtcgcctctcctcccggg
gtgatcacgggcggcgcggtgcgcttccagggcgaagatcttgttggtgcgccctacgag
acgctgcggcagaaacgcggtgaccgcgtcgcctacatcttccaggacccgctctcgacc
ctgcacccgctctacaaggtgggccagcagttggccgaggcgatccagtcgcaccaccgc
gtctcgaacgccgaggcccgctcccgcgccatccagcttctgaaagacgtgcgcatcccc
aacgccgaaagccgcgtcgacaactacccgcacgaaatgtcgggcgggatgcgccagcgc
gtcggcatcgccatgtcgctggccaacgagccggacgtgatcatcgccgacgagcccaca
accgccctcgacgtcaccgtgcaggcccagatcctgtcgctcctcgacgacctgcgccgc
gagcgcggcctcgccatcatcttcatcacccacgatttcggcgtcgtggcccagctctgc
gaccggatggcggtgatgtatgccggccgtatcgtcgaagaggggccgaccggcagcgta
ctgtcgcacccgctccacccctacaccaagcgcctgatcgcctgcgtgccggaactcggc
gaaggccgccgcgagatggccgccatccccggcctgccgccggtggtcgacgacctgccg
cccggctgcgccttcgcgccgcgctgcgaaaaggcccgcgaggagtgccggcagggcgac
atcaccctcgaccgctcgggcgcccgcgcggtgcgctgcctctaccccgaggaaacgcta
tga
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