KEGG   Roseovarius indicus: RIdsm_00712
Entry
RIdsm_00712       CDS       T06222                                 
Symbol
oppD_1
Name
(GenBank) Stage 0 sporulation protein KD
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02034  peptide/nickel transport system permease protein
Organism
rid  Roseovarius indicus
Pathway
rid02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rid00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RIdsm_00712 (oppD_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rid02000]
    RIdsm_00712 (oppD_1)
Transporters [BR:rid02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    RIdsm_00712 (oppD_1)
SSDB
Motif
Pfam: BPD_transp_1 ABC_tran oligo_HPY OppC_N AAA_21 AAA_16
Other DBs
NCBI-ProteinID: QEW24928
UniProt: A0A0T5P4T9
LinkDB
Position
complement(731055..732917)
AA seq 620 aa
MAFLKLLFRNKLAAMGAVVLAFIVVLVILTPILPLQNPDITATADRFKRPFTDGHLLGTD
HLGRDLLSRLLWGTRLSLAVGVAAAVLAAFFGSAIGITAGYFGGKVDNIFMRGVDMLMAF
PYILLALAIVAALGPGLMNALIAVAAVNVPFFARNIRGITVGLAGREFIDAARLAGMGHA
RIILTELLPNVLPVIIIAMSTTVGWMILETAGLSFLGLGSQPPQADLGSMLGEARSALIS
HPHTSVVPGIMIFLIVMSINLLGDGVRDALDPRLRSGALSRPLPTTLVNRKGNIPAATDD
LLAIQELETQFHVGKRIYKAVGGVSLAVKPGECLGVIGESGSGKSVTALSVMGLVASPPG
VITGGAVRFQGEDLVGAPYETLRQKRGDRVAYIFQDPLSTLHPLYKVGQQLAEAIQSHHR
VSNAEARSRAIQLLKDVRIPNAESRVDNYPHEMSGGMRQRVGIAMSLANEPDVIIADEPT
TALDVTVQAQILSLLDDLRRERGLAIIFITHDFGVVAQLCDRMAVMYAGRIVEEGPTGSV
LSHPLHPYTKRLIACVPELGEGRREMAAIPGLPPVVDDLPPGCAFAPRCEKAREECRQGD
ITLDRSGARAVRCLYPEETL
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggccttcctcaagctgctcttccgcaacaagctggcggcaatgggggcggtcgtgctg
gcattcatcgtggtgctggtgatcctcacccccatcctgccgctgcagaaccccgacatc
accgccaccgccgaccgcttcaagcggcccttcaccgatgggcacctgctgggcaccgat
cacctcggccgcgacctcctcagccgcctgctctggggcacccggctttccctcgccgtg
ggcgtggcggccgccgtgctggcggccttcttcggctcggccatcggcatcaccgccggc
tatttcggcggcaaggtcgacaacatcttcatgcgcggcgtcgacatgctgatggccttt
ccctacatcctgctggcgctggccatcgtcgcggccctcggccccggcctgatgaacgcg
ctcatcgccgtggccgccgtcaacgtccccttcttcgcccggaacatccgcggcatcaca
gtgggcctcgcggggcgcgaattcatcgacgccgcccgcctcgccggcatgggtcacgcc
cgcatcatcctgaccgagcttctgcccaacgtcctgccggtcatcatcatcgccatgtcc
accaccgtcggctggatgatccttgaaaccgccggcctctccttccttggcctcggctcg
cagccgccgcaggccgatctcggctccatgctgggcgaggcgcgctcggccctcatctcc
cacccgcacacctcggtcgtgccggggatcatgatcttcctgatcgtcatgtccatcaac
ctcctcggcgacggggtgcgcgacgcgctcgacccgcgcctgcgctcgggcgccctgtcg
cgcccgctgcccacgacgctcgtgaaccgcaagggcaacatcccggcggccaccgacgac
ctcctcgccatccaggagctcgaaacccagttccacgtgggcaagcgcatctacaaggcc
gtcggcggcgtttccctcgccgtgaaaccgggcgaatgtctcggcgtcatcggcgaatcc
ggctcgggcaagtcggtcacggcgctgtcggtcatgggtctggtcgcctctcctcccggg
gtgatcacgggcggcgcggtgcgcttccagggcgaagatcttgttggtgcgccctacgag
acgctgcggcagaaacgcggtgaccgcgtcgcctacatcttccaggacccgctctcgacc
ctgcacccgctctacaaggtgggccagcagttggccgaggcgatccagtcgcaccaccgc
gtctcgaacgccgaggcccgctcccgcgccatccagcttctgaaagacgtgcgcatcccc
aacgccgaaagccgcgtcgacaactacccgcacgaaatgtcgggcgggatgcgccagcgc
gtcggcatcgccatgtcgctggccaacgagccggacgtgatcatcgccgacgagcccaca
accgccctcgacgtcaccgtgcaggcccagatcctgtcgctcctcgacgacctgcgccgc
gagcgcggcctcgccatcatcttcatcacccacgatttcggcgtcgtggcccagctctgc
gaccggatggcggtgatgtatgccggccgtatcgtcgaagaggggccgaccggcagcgta
ctgtcgcacccgctccacccctacaccaagcgcctgatcgcctgcgtgccggaactcggc
gaaggccgccgcgagatggccgccatccccggcctgccgccggtggtcgacgacctgccg
cccggctgcgccttcgcgccgcgctgcgaaaaggcccgcgaggagtgccggcagggcgac
atcaccctcgaccgctcgggcgcccgcgcggtgcgctgcctctaccccgaggaaacgcta
tga

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