Roseovarius indicus: RIdsm_00778
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Entry
RIdsm_00778 CDS
T06222
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00778
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIdsm_00778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QEW24994
UniProt:
A0A0T5P4K4
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All DBs
Position
808752..809771
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AA seq
339 aa
AA seq
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MRKLHAIATATAMLALCTSGAATAQEKVLRVMNSGGSYGDSIEECVNKPLMEQAGIKVVQ
ESPGGFAKLQAQGRSGVIANTTTDASTGELLRMVAADLVEPIDWEKLDPLPMFDEAKAEY
GFGASFYSTIMAWDAEKEEPADWVAFFDTEANPGMRALPDYPDFVLPFAALGGGQSIESI
SEGVDLDLAFETLNRVKDDVVWWQSGAQPPQLLQDGEADYAIAWSGRVMGQEGVDHSFKD
GMLDISWWVIAKGITDEEREMLYAWLKLQTDANVQKCLIEFLPYPGPSPDLADLVSEEQA
KTFPTYSANKDVQWLVPGQWWFDNADEVERRWNEFKLSL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaactgcatgcaatcgcaaccgcgacggccatgttggcgctgtgcacgtccggc
gcggccacggcccaggaaaaggtgctcagggtgatgaactctggcggctcgtatggtgac
agtatcgaggaatgtgtgaacaagcccctgatggagcaggcgggcatcaaggtggtgcag
gaaagcccgggcggctttgccaagcttcaggcgcagggccggtccggcgtgatcgccaac
accacgacagatgcctcgaccggagagttgctgcgcatggtggcggccgacctggtcgag
ccgatcgactgggagaagcttgacccgctgccgatgttcgacgaggcgaaggccgagtat
ggctttggcgcgtcgttctattccaccatcatggcctgggatgccgagaaggaggagccg
gcggactgggtcgctttcttcgacaccgaggcgaacccggggatgcgggcgctgcccgac
tatccggatttcgttctgccctttgccgcgctgggcggtggccagtcgatcgagagcatt
tccgagggtgtcgacctcgacctggctttcgagacgctgaaccgggtgaaggacgatgtc
gtctggtggcagtcaggggcgcaaccgccgcagcttctgcaggatggcgaggcggattac
gcgatcgcgtggtcgggccgcgtgatgggccaggagggcgttgaccacagcttcaaggac
gggatgcttgatatctcgtggtgggtgatcgccaagggtatcaccgacgaggagcgggag
atgctgtacgcgtggctcaagctgcagaccgatgcgaatgtgcagaaatgcctgatcgag
ttcctgccctatccggggccgagcccggaccttgccgacctggtgagcgaggagcaggcg
aagaccttcccgacctattccgccaacaaggatgtgcagtggctggttccgggtcagtgg
tggttcgacaatgccgatgaagttgagcgtcgctggaatgaattcaagctcagcctctga
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