Roseovarius indicus: RIdsm_00922
Help
Entry
RIdsm_00922 CDS
T06222
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_00922
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RIdsm_00922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
DprA_WH
HTH_11
HTH_Crp_2
PaaX
HTH_24
MarR_2
TrmB
HTH_IclR
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QEW25137
UniProt:
A0A5P3A6Z4
LinkDB
All DBs
Position
960798..961550
Genome browser
AA seq
250 aa
AA seq
DB search
MATQVERATQLLREAVQSGAYGADEKLAEMHLAEDLGMSRTVIRAALSALELEGLVTRTP
NRGFRTRRFTLDEVADSIILRGEVEAIAARYACERGLSEEDLQRFETVLDEMAAILDCGF
FEVEHRLKWMELVAKFHDLLVECSGSSAIRYSIDHLKRIPLVAPYSVMFDLSSEDYSLGR
IRTTFEMRQQIVEALRLRQAGRASALMIAYAYQACNNKRESVEAMRSGREMSPTPGLGLI
AQGKDGQDPR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcaggtagaacgggcgacccagcttttgcgggaagccgtgcagagcggggcc
tatggggccgacgagaagctggccgagatgcacctggccgaggatctgggcatgtcgcgg
acggtgatccgtgccgccctgagtgcgctggagctggaagggctggtcacgcggacgccg
aaccgggggttccggacccgtcggttcacgctggacgaggtggcggattcgatcatcctg
cgcggcgaggtcgaggcgatcgcggcaaggtatgcctgtgagcggggcctgtcggaggag
gatctgcagcgcttcgagaccgtgctggacgagatggcggccattctagactgcgggttc
ttcgaggttgagcaccggctgaaatggatggagctggtggcgaagttccatgacctgctg
gtggaatgctcgggcagttccgcgatcaggtattccatcgaccacctgaagcgcattccg
ctggtggcgccctacagcgtgatgttcgatctttcgtcggaagattacagccttggccgg
atccgcacgaccttcgagatgcggcagcagattgtcgaggcgttgcgcctgcgccaggcg
ggccgggcctcggcgctgatgatcgcgtatgcgtaccaggcgtgcaacaacaagcgggag
agcgtcgaagccatgcggagcggcagggagatgtcgccgacgccggggcttgggctgatc
gcgcagggcaaggacgggcaagacccccggtga
DBGET
integrated database retrieval system
