Roseovarius indicus: RIdsm_00965
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Entry
RIdsm_00965 CDS
T06222
Symbol
lptB_3
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_00965 (lptB_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_00965 (lptB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_00965 (lptB_3)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_00965 (lptB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
SMC_N
AAA_29
AAA_27
AAA_30
RsgA_GTPase
AAA_23
AAA_10
MukB
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QEW25180
UniProt:
A0A0T5P3V1
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All DBs
Position
1011257..1012021
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AA seq
254 aa
AA seq
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MLEAKGLSRSFGRLVAVDQLDLSVGRGTIHGLIGPNGSGKSTTMNLISGSLKPSAGQVFL
NDGRIDGRHQDALAQEGLIRTFQLTRVYAELTVFEAVRLGALARNRGTLDWRAVLPFPKR
GPSADRTMQAIEKMGLGDVANQMAGSLPGGRQRVLSIATALAASPQCLLLDEPLAGLNAT
EKADVATRIELLRDEGITILLVEHDMKSVMRLCDRVTVINFGQRIAEGAPAEIGRNEAVI
KAYLGEKGARHAAG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggcgaagggattgtcgcgcagtttcggcaggttggttgccgtggaccagctt
gacctgtcggtggggcgcggaaccatacacgggcttatcgggcccaacgggtcgggcaaa
tcaacgaccatgaacctcatcagcggatcgctgaagcccagtgccggacaggtgttcctc
aatgatggccgtatcgacggcaggcaccaggacgcgctggcacaggaaggtctgatacgt
acgtttcagctaacgcgggtctatgcggagcttaccgtatttgaagcagtgcgccttggg
gcgctggccaggaaccgcgggaccctggactggcgcgcagtgttgccatttcccaagcgt
ggccccagcgcggatcgcacaatgcaggcgatcgagaagatgggcctcggagatgtcgcg
aaccagatggccgggagcctgccgggtgggcggcaacgcgtgctttcaattgcgaccgca
ctggctgcttcccctcaatgtcttcttctggatgaaccgctggcggggttgaacgccacc
gaaaaggccgatgtagcgacgcgcatcgagctgctgcgcgacgagggcatcacgatattg
ctggtggagcacgatatgaaatcggtcatgcgtttgtgcgaccgcgtcacggtcatcaat
tttggccagcgcatcgcggaaggtgcgccggcggagatcggcaggaacgaggccgttatc
aaagcctatctcggggaaaagggggcgcgtcatgctgcgggttga
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