Roseovarius indicus: RIdsm_01176
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Entry
RIdsm_01176 CDS
T06222
Symbol
livF_5
Name
(GenBank) LIV-I protein F
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_01176 (livF_5)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_01176 (livF_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_01176 (livF_5)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_01176 (livF_5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
MeaB
AAA_30
MMR_HSR1
AAA_22
AAA_15
AAA_27
BCA_ABC_TP_C
AAA_25
AAA_28
TsaE
SRP54
NPHP3_N
DUF815
NB-ARC
NACHT
Motif
Other DBs
NCBI-ProteinID:
QEW25390
UniProt:
A0A0T5PBP7
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All DBs
Position
1242135..1242857
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AA seq
240 aa
AA seq
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MQPDAPTLDLSGVSSGYGSFPVLHNIDLKVEKGTIVALIGANGAGKSTLIKTVSGLVRTK
GGKIVFNGQDCTSHSPDKMIRAGLGLVPEGRRLFGDMTLRENLEMGAYARSDKHAIAKDF
ERVLALFPELRDRLSTVASSFSGGQQQMVAIARALMGAPKLLLLDEPTIGLAPVVVERVA
NLIREISEMGVDILLIEQNAEVALTIADYGYVLENGKVVMENKADVLLDDPQVQTAYLGI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgacgcgccgaccctcgatctgtccggggtgtcatccggctatggcagcttc
ccggttttgcacaatatcgacctcaaagtcgaaaagggcaccatcgtcgcgctgatcggt
gccaacggcgccggcaagtcgaccctcatcaagaccgtcagcggcctcgtccgtaccaag
ggcggcaagatcgtcttcaacggtcaggactgcaccagccacagccccgacaagatgatc
cgcgcaggccttggcctcgtcccggaagggcgccgtctcttcggcgacatgaccctgcgc
gagaatctcgaaatgggcgcctatgcccggtccgacaaacacgccatcgccaaggatttc
gagcgtgtgctggcgcttttcccagagctgagagatcggctttcaaccgtggcgtcctcg
ttcagcggcgggcagcaacagatggttgccatcgcgcgggccctcatgggcgcaccaaag
ctcttgctgctcgacgaaccgacgatcggtctcgcccccgtggtcgtggagcgcgtggcc
aacctgatccgggaaatctccgagatgggcgtcgacatccttctgatcgaacagaacgcc
gaggtcgcgctgaccatcgcggattacggctatgttctggagaacggcaaggtggtgatg
gaaaacaaggccgacgtgctcctcgacgacccgcaggttcagacggcctatctgggcatc
tga
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