KEGG   Roseovarius indicus: RIdsm_01176
Entry
RIdsm_01176       CDS       T06222                                 
Symbol
livF_5
Name
(GenBank) LIV-I protein F
  KO
K01996  branched-chain amino acid transport system ATP-binding protein
Organism
rid  Roseovarius indicus
Pathway
rid02010  ABC transporters
rid02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rid00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RIdsm_01176 (livF_5)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RIdsm_01176 (livF_5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rid02000]
    RIdsm_01176 (livF_5)
Transporters [BR:rid02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    RIdsm_01176 (livF_5)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_16 RsgA_GTPase AAA_23 MeaB AAA_30 MMR_HSR1 AAA_22 AAA_15 AAA_27 BCA_ABC_TP_C AAA_25 AAA_28 TsaE SRP54 NPHP3_N DUF815 NB-ARC NACHT
Other DBs
NCBI-ProteinID: QEW25390
UniProt: A0A0T5PBP7
LinkDB
Position
1242135..1242857
AA seq 240 aa
MQPDAPTLDLSGVSSGYGSFPVLHNIDLKVEKGTIVALIGANGAGKSTLIKTVSGLVRTK
GGKIVFNGQDCTSHSPDKMIRAGLGLVPEGRRLFGDMTLRENLEMGAYARSDKHAIAKDF
ERVLALFPELRDRLSTVASSFSGGQQQMVAIARALMGAPKLLLLDEPTIGLAPVVVERVA
NLIREISEMGVDILLIEQNAEVALTIADYGYVLENGKVVMENKADVLLDDPQVQTAYLGI
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcagcctgacgcgccgaccctcgatctgtccggggtgtcatccggctatggcagcttc
ccggttttgcacaatatcgacctcaaagtcgaaaagggcaccatcgtcgcgctgatcggt
gccaacggcgccggcaagtcgaccctcatcaagaccgtcagcggcctcgtccgtaccaag
ggcggcaagatcgtcttcaacggtcaggactgcaccagccacagccccgacaagatgatc
cgcgcaggccttggcctcgtcccggaagggcgccgtctcttcggcgacatgaccctgcgc
gagaatctcgaaatgggcgcctatgcccggtccgacaaacacgccatcgccaaggatttc
gagcgtgtgctggcgcttttcccagagctgagagatcggctttcaaccgtggcgtcctcg
ttcagcggcgggcagcaacagatggttgccatcgcgcgggccctcatgggcgcaccaaag
ctcttgctgctcgacgaaccgacgatcggtctcgcccccgtggtcgtggagcgcgtggcc
aacctgatccgggaaatctccgagatgggcgtcgacatccttctgatcgaacagaacgcc
gaggtcgcgctgaccatcgcggattacggctatgttctggagaacggcaaggtggtgatg
gaaaacaaggccgacgtgctcctcgacgacccgcaggttcagacggcctatctgggcatc
tga

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