Roseovarius indicus: RIdsm_01484
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Entry
RIdsm_01484 CDS
T06222
Name
(GenBank) spermidine/putrescine ABC transporter periplasmic substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_01484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_01484
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIdsm_01484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QEW25697
UniProt:
A0A5P3A8M2
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All DBs
Position
1596304..1597338
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AA seq
344 aa
AA seq
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MKTLNKLLVSAAFLPSMAMSQELTFATAGGVWLETITEACLDPYAESAGVEVAGVATEDT
AAQIRAQMMTQIQWDIVEVPSAVLALGTAEGWFEPLDWDKIDPENQLPDVARQENGIGFT
TYSEGIVYRTDGENDPINSWADFWNVEEFPGNRSLRDTPLGNLEYALLADGVSKEELYDV
LSSEEGVDRAFAKLDEIKPNITVWWTAGQQPIQYIASGDVDYSTTWNGRVTSAVEDGIPA
GFVWNEAALIVGYYAVMKGSEQVDLANDLLKFCWTDPQISANVVERMPYPGFAPGLYDLL
PEETAQNLSTFPANEEVQFAFDGGFWAENRPELQDRWQSWRLSN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactgaacaaactgcttgtctcggcggcgttcctgccgtcgatggcaatgtcg
caggaattgactttcgcaaccgccggcggtgtctggctggaaacgattaccgaggcctgc
ctcgacccgtatgctgaatcggcgggcgtcgaagtcgcgggcgtggccacggaagatacg
gccgcccaaatccgcgcgcagatgatgacccagatccagtgggatatcgtcgaggttcct
tctgccgtgctcgcgctcggcaccgccgaaggctggttcgagcccctcgactgggacaag
atcgacccggagaaccagctgcctgatgtcgcgcgtcaggaaaacggcatcggcttcacc
acctattccgaaggcattgtctatcgcaccgatggcgagaacgacccgatcaactcctgg
gccgatttctggaatgtcgaggagttccccggcaaccgctcgctgcgcgatacgccgctc
ggcaaccttgaatacgctctgctggcagacggcgtgtcgaaagaagagctctacgacgtg
ctgtcgagtgaagaaggcgtcgaccgtgcattcgccaagctcgacgagatcaagccgaac
atcaccgtctggtggacggccggtcagcagccgatccagtatatcgcaagcggcgatgtg
gattactccaccacgtggaacggccgcgtgacctccgccgtggaagacggcatcccggcg
ggtttcgtctggaacgaagcggcgctcatcgtggggtactacgccgtgatgaaggggagc
gagcaggtggatctcgccaatgacctgctgaagttctgctggaccgatccccagatcagc
gcgaacgtggtcgaacggatgccgtacccgggtttcgcccccggcctctatgatctgctg
ccggaagaaacggcgcagaacctgtcgaccttcccggcaaatgaagaggtgcagttcgcc
ttcgacggtggcttctgggccgagaaccgtcccgagctgcaggaccgctggcagtcctgg
cgcctgtcgaactga
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