Roseovarius indicus: RIdsm_01515
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Entry
RIdsm_01515 CDS
T06222
Symbol
cynR_4
Name
(GenBank) Cyn operon transcriptional activator
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_01515 (cynR_4)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIdsm_01515 (cynR_4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR
TPR_NUP120_160
Motif
Other DBs
NCBI-ProteinID:
QEW25726
UniProt:
A0A0T5PBN6
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All DBs
Position
1633378..1634298
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AA seq
306 aa
AA seq
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MEFRQMKAFQTVARAGSLSQAAMSLSVSQPMVTRHIRQLEEELGVELFHRTGRGVVLTEA
GVMLKEYVDEIIDREEVARNVVSAMQKSPKGKLVLGVPPSVGTVLTVPLVKKIKNEFPNV
TLRVIEGFSGHVLEWLTVGRIDAAVLYNPPRLPSVVTEPLVEDELCLIGPMVARNAPDTP
VVSLEVMSSLPMILPSRPHGLRRLIDDEMTKAGFELRVDMELEAMSSNLMLVEESSGYTV
LPYATVHRLVQQRRVRAWRFDPSLSRQLLLATSTSKPMSPLIRSMMRTFRQEVRDIISSF
PWRPGP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcggcaaatgaaagcctttcagactgtagcgcgtgcgggcagcctttcgcag
gctgcgatgagcttgtccgtaagccagccgatggtcacgcgacacattcgccagcttgag
gaagaattgggagtcgagctgtttcaccgcaccggccgcggtgtcgtgttgaccgaggct
ggcgtcatgctgaaggaatatgtcgatgagatcatcgaccgcgaggaggtggcgcgcaat
gtcgtttcagccatgcagaagagcccgaaaggcaaacttgtcctcggtgtgccgccttca
gttggaaccgttctgaccgtaccgttagtgaaaaagatcaagaacgagttccccaatgtt
acgttgagggtgatcgagggattctcgggacatgtgctggagtggttgacggtcggacgg
atagatgcggctgtgctttacaatccgccgcggctgccatcggtcgtgacggagcctctg
gtcgaggatgagctttgtctgatcggtccgatggttgcgcggaatgcaccggatacgccg
gttgtaagtctcgaagtgatgtcgagcctgcccatgatcctgcccagccgtccccacgga
ttgcggcgccttattgatgacgaaatgacgaaggccggcttcgaacttcgcgtcgacatg
gagctggaagcgatgtcgtcaaacctgatgctggtggaggaatcctcgggatatacggtg
ttgccttatgccacggtgcacaggctggtgcagcagcgccgcgtgcgcgcttggcggttt
gacccctccctgtcccggcagcttcttctggcgaccagcacaagcaagccgatgtcacct
ctgatccggtcgatgatgcggaccttcaggcaggaggtgcgcgatatcatttcaagcttt
ccctggcgcccgggaccatga
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