Roseovarius indicus: RIdsm_01569
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Entry
RIdsm_01569 CDS
T06222
Symbol
potD_6
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein precursor
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_01569 (potD_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_01569 (potD_6)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIdsm_01569 (potD_6)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QEW25780
UniProt:
A0A0T5NXJ8
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Position
complement(1696697..1697767)
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AA seq
356 aa
AA seq
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MMKRREFITTTSAAALGTLAAPSLALAQDKTLKVGTYGGYFEESFKTHIFPDFTEATGIE
VESIAEPTGEAWLVQLQQAARAGQAPADVSMMAQVARIRGERANLWAELDRSAMPNVENL
PDHFVHGYEGAGFYGTGAVSWYISLVSNTDVYPDAPESWTTLWDPANENSLGLLALASNS
FLLEITGHCYFDGTDILATEEGVLEVMNKLAEVKPNVRLWYRDEGQFQQALETGEIPMGQ
YYHDVTGLAAADGKPVRSTFPKEGAVLDSGSWVVSKASEAIEASQVFIDYMSQPEIQSKL
SRFVGTAPTIPRDMTDLTDEEFAAVSSEQEPILPRYELYVDKADWVNQKWSELVTG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagacgcgaattcattacgacgaccagtgcggccgcgctcggcacgctcgcg
gcgccgtccctcgccttggcgcaggacaagacgctcaaggtgggcacctacggcggctat
ttcgaggaaagcttcaagacccatatcttccccgatttcaccgaggccaccggcatcgag
gtcgaatcgatcgccgagcccacgggcgaggcctggctcgtccagctgcaacaggccgcc
cgcgccggccaggcgccggccgacgtctcgatgatggcgcaggtcgcgcgcatccgcggc
gagcgcgccaacctctgggccgaactcgaccgcagcgccatgcccaatgtcgaaaacctg
ccggatcacttcgtgcacggctatgaaggtgcagggttttacggcaccggcgcggtgtcc
tggtacatcagcctggttagcaacaccgatgtatatcccgatgcccccgaaagctggacg
acgctctgggatccggccaacgagaacagcctcggtctgctggccctggcgtcgaactcc
ttcctgctcgagatcaccgggcattgctacttcgacggcaccgacattctcgccaccgag
gaaggcgtgctggaggtcatgaacaagctggcggaagtgaagccgaatgtccgcctgtgg
taccgcgacgaaggccagttccagcaggcgctggaaaccggcgagatcccgatgggtcag
tattaccacgacgtgaccggcctcgcagcagccgatggcaagccagtacgctcgaccttc
ccgaaagagggcgccgtgcttgattccggctcctgggtggtgtccaaggcttccgaggcg
atcgaggccagccaggtcttcatcgactacatgtcccagccggaaatccagtcgaaactc
tcgcgcttcgtcggcaccgcaccgacgatcccgcgcgacatgaccgacctcacggacgag
gaattcgccgccgtctcttcagagcaggagccgatcctgccgaggtacgaactctatgtc
gacaaggccgactgggtgaaccagaagtggtccgagctcgtcaccggctaa
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