Roseovarius indicus: RIdsm_01684
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Entry
RIdsm_01684 CDS
T06222
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rid03016
]
RIdsm_01684 (miaB)
Enzymes [BR:
rid01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RIdsm_01684 (miaB)
Transfer RNA biogenesis [BR:
rid03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RIdsm_01684 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QEW25894
UniProt:
A0A0T5PDM0
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All DBs
Position
1819556..1820890
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AA seq
444 aa
AA seq
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MAEAKKLYIKTYGCQMNVYDSERMAEAMGGAGYVETQSPDDADMILLNTCHIREKAAEKV
YSELGRFRGLKEARPDLKIGVAGCVAQAEGEEIMRRQPMVDLVVGPQSYHRLPELEAKAR
AGTKALDTDFPLEDKFDALKNRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPA
TRVLDEARDLVERGVREITLLGQNVNAYHGEGPDGKDWSLARLIWALNDIDGLERIRFTT
SHPNDMDDDLIAAHGECEKLMPYLHLPVQSGSDRILKRMNRSHTAESYLRLIERIRAARP
DILMSGDFIVGFPEETEADFQATLDLIEEVQYGYAFSFKYSPRPGTPAAERSMVDEAEAS
ERLQRLQALITRQQRAVQDSMVGRRVKVLFEKPGRLPGQMVGKSDYLHAVHVAESDAQPG
ELSEVEIIESGANSLAGRPVQGLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgaagaagctctacatcaagacctatggatgccagatgaacgtctatgac
agcgagcgcatggccgaggccatgggcggcgcgggctatgtcgagacgcaatcgcctgac
gatgccgacatgatcctgctgaacacctgtcacatccgggaaaaggcggccgagaaggtc
tattccgagctgggccggttccgcgggctgaaagaggcgcgccccgatctcaagatcggc
gtggcgggctgcgtggcccaggccgagggcgaggagatcatgcgccgccagccgatggtc
gaccttgtcgttggcccgcaaagctatcaccgcctgcccgagctcgaggccaaggcgcgg
gccgggacaaaggcgctcgacaccgacttcccgctcgaggacaagttcgacgcgctgaag
aaccgccccaaggccaagcgcggcccgaccgccttcctgaccgtgcaggaaggctgcgac
aagttctgcgccttctgcgtggtcccctatacccgcggcgccgaggtcagccggccggcg
acgcgcgtgctcgacgaggcgcgcgacctggtcgagcggggcgtgcgcgagatcaccctg
ctgggccagaacgtcaacgcctaccacggcgaaggccccgacggcaaagactggtcgctg
gcgcggctgatctgggccctcaacgatatcgacgggctggagcgcatccgcttcaccacc
tcgcaccccaacgacatggatgacgacctgatcgcggcccatggcgaatgcgagaagctg
atgccctacctgcacctgcccgtgcagtcgggcagcgaccgcatcctcaagcggatgaac
cgcagccacaccgccgaaagttacctgcggttgatcgagcggatccgcgcggcgcggccc
gatatcctgatgtcgggcgatttcatcgtcggcttcccggaagagaccgaggccgatttc
caggcgacgctcgatctcatcgaggaagttcagtacggttacgccttttccttcaagtat
tccccgcgtcccggcacgccggccgccgagcggtcgatggtcgacgaggccgaggcctcg
gagcggctgcaacggctgcaggcgctgatcaccaggcagcagcgcgcggtgcaggattcc
atggtcggccgccgggtcaaggtgctcttcgagaaaccgggccgtctgcccggccagatg
gtgggcaagtcggattacctgcatgccgtgcacgtggccgaatctgatgcgcagccgggc
gagctttcggaggtcgaaatcatcgaaagcggggccaattcattggccggccggcccgtg
cagggcctctcttaa
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