Roseovarius indicus: RIdsm_01794
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Entry
RIdsm_01794 CDS
T06222
Symbol
bigR_1
Name
(GenBank) Biofilm growth-associated repressor
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_01794 (bigR_1)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
RIdsm_01794 (bigR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
MarR_2
PaaX
HTH_27
HxlR
HTH_20
TrmB
HTH_Cmi2_C
HTH_Crp_2
MarR
UxuA
PadR
Fe_dep_repress
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QEW26000
UniProt:
A0A5P3ABQ5
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Position
complement(1932904..1933293)
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AA seq
129 aa
AA seq
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MRLGFHRGRAPSPPADDAPLPPEPPAPVPQDELDRIVQSAADASAFLKAISHEGRLLILC
HLSSGEKSVTELEDLLSARQAAVSQQLSRLRTEGLVTPRREGKAIYYRLTDNRAIRILDT
VYELFCRCG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgagactgggcttccatcgcgggcgcgcaccctcgccccctgccgatgacgcccccctg
ccgcccgaacccccggcccccgtcccgcaggacgagcttgaccgaatcgtgcagagcgcg
gccgacgcctcggctttcctcaaggccatcagccacgagggccgcctgctgatcctctgc
catctctcctccggcgaaaagtccgtcaccgagctcgaagacctgctctcggcccgtcag
gcggcggtctcgcaacagctctcgcgcctgcgcaccgaggggctcgtgactccaaggcgc
gagggcaaggcgatctactaccgtttgacagataaccgcgccatcagaatactggatacc
gtctacgagcttttctgccggtgcggctga
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