Roseovarius indicus: RIdsm_01883
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Entry
RIdsm_01883 CDS
T06222
Symbol
fadJ_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rid
Roseovarius indicus
Pathway
rid00071
Fatty acid degradation
rid00280
Valine, leucine and isoleucine degradation
rid00310
Lysine degradation
rid00362
Benzoate degradation
rid00380
Tryptophan metabolism
rid00410
beta-Alanine metabolism
rid00640
Propanoate metabolism
rid00650
Butanoate metabolism
rid00907
Pinene, camphor and geraniol degradation
rid00930
Caprolactam degradation
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
rid01212
Fatty acid metabolism
Module
rid_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RIdsm_01883 (fadJ_1)
00650 Butanoate metabolism
RIdsm_01883 (fadJ_1)
09103 Lipid metabolism
00071 Fatty acid degradation
RIdsm_01883 (fadJ_1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIdsm_01883 (fadJ_1)
00310 Lysine degradation
RIdsm_01883 (fadJ_1)
00380 Tryptophan metabolism
RIdsm_01883 (fadJ_1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RIdsm_01883 (fadJ_1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RIdsm_01883 (fadJ_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RIdsm_01883 (fadJ_1)
00930 Caprolactam degradation
RIdsm_01883 (fadJ_1)
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RIdsm_01883 (fadJ_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RIdsm_01883 (fadJ_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RIdsm_01883 (fadJ_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
AlaDh_PNT_C
DNApolII_N
Motif
Other DBs
NCBI-ProteinID:
QEW26089
UniProt:
A0A0T5PCJ5
LinkDB
All DBs
Position
complement(2026237..2028300)
Genome browser
AA seq
687 aa
AA seq
DB search
MTDDVLDQITPDEVTDAPAAPDARHWRKELRGDQIVLWLDCADTGTNVISEEVLRELDTL
LDDAKAATPKALVIRSAKPGGFAAGADIDGFADLRGDDAVEMLQQGHAVLDKLADLPFPT
VAVVHGATLGGGFELALACDYRIGIEGVKLGFPEIQLGLHPGLGGTFRLTSLIDPTEAMQ
MMLTGKTAHDRKAKKLGILDALVPERHVAAATDAAASGKMERDHGGFRASALRTGVARNL
AATRMRAESEKKAPRAHFPAPFALIDLWEDHGDDPAEMQKAEIASFAELLNSPTAQNLIR
VFFLRRNLKAAGKGDDGIAHVHVIGAGAMGAEIAAWSAMQGKRVTIEDVKLDPLGATIRR
ATKIYEKKHLKSIEKRDALDRLMPDPQGLGRARADLVIEAAPEKLELKEKIYASLADVMK
PGAILATNTSSLKLADLVSAAPDAKRFAGLHFFNPVSQMPLVEVVSHKKASADTLDRLAA
FTTGVDRLPARVKDYPGFLVNRVLAPYLMEAMVMLDEGYSKEEIDRAALTFGMPMGPVTL
ADQVGLDICLEVANSMQNGLETPVADTPAWLPEKVEKGETGKKAGKGLYDYDSETPPDTP
ADDPDQAIIDRLILPMCNAAIECLRKGVAPDADTIDGAVIFGTGWAPFRGGPLHYAKTRR
DVPKTLEQLADRHGPRFTPDPGWGDLV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacgtactcgaccagatcacccccgatgaagtcaccgacgcgcccgccgct
cccgacgcacggcattggcgcaaggaattacgcggcgaccagatcgtcctgtggctcgac
tgcgccgacaccggcaccaacgtcatctccgaagaggtcctgcgcgagctcgacaccctg
ctcgacgatgccaaggccgcgacccccaaggcgctcgtcatccgctccgccaaaccgggc
ggctttgccgccggcgccgatatcgacggcttcgccgacctgcgcggcgacgatgccgtc
gagatgctgcaacagggccacgccgtcctcgacaagctggccgacctgcccttcccgacc
gtggccgtggtccacggcgccacgctcggtggcggcttcgagctggccctagcctgcgac
taccgcatcggcatcgagggcgtgaaactgggcttccccgaaattcagctcggcctgcac
cccggccttggcggcaccttccgcctgacctcgctcatcgacccgacagaagcgatgcag
atgatgctcaccggcaaaaccgcccatgaccgcaaggccaagaaactcggcatcctcgac
gcgctcgtccccgagcgccatgtcgcagccgccaccgacgccgccgcctccggcaagatg
gagcgcgaccacggcggcttccgcgcctccgccctgcgcaccggcgtcgcccgcaatctc
gccgccacccgcatgcgtgccgaaagcgagaagaaggcgccccgcgcgcatttccccgcc
cccttcgcgctgatcgacctgtgggaagaccacggcgacgacccggccgaaatgcaaaag
gccgagattgcctcctttgcggaactactgaacagccccaccgcccagaacctcatccgc
gtctttttcctgcgccgcaatctcaaggcggccggcaagggcgatgatggcatcgcccat
gtccacgtgatcggcgccggcgcgatgggcgcggaaatcgccgcatggtccgccatgcag
ggcaagcgcgtcaccatcgaggacgtcaagctcgaccccctcggcgccaccatccgccgc
gccacgaaaatctacgagaagaagcacctcaagagcatcgagaagcgcgacgccctcgac
cgcctcatgcccgatccgcaagggctcggtcgggcccgcgccgacctcgtgatcgaagcg
gccccggaaaagctggaactgaaagagaaaatctacgcgagcctcgccgacgtgatgaaa
cccggcgcgatcctcgccaccaacacctccagcctcaagcttgccgatctcgtaagcgcc
gcccccgatgccaagcgcttcgcaggcctccacttcttcaacccggtcagccagatgccc
ctggtcgaagtggtttcgcacaagaaggcctccgccgacacgctcgaccggctcgccgcc
ttcaccaccggcgtcgaccgcctgcctgcgcgggtcaaagactaccccggcttcctcgtg
aaccgcgtcctcgccccctacctgatggaggcgatggtcatgctcgacgagggctattcc
aaggaagagatcgaccgcgcggccctcaccttcggtatgcccatgggcccggtgacgctc
gccgaccaggtcgggctagacatctgtctcgaggtggccaactcgatgcaaaacggtctc
gaaacgcccgtcgccgacacccccgcctggcttccggagaaggtcgagaaaggcgaaacc
ggcaagaaggccggcaagggcctttacgactacgacagcgaaacgccgcccgacacgccc
gccgacgaccccgatcaggcgatcatcgaccgtctcatcctgcccatgtgcaacgccgcc
atcgaatgcttgcgcaagggcgtcgccccagatgccgacacgatcgacggcgccgtcata
ttcggcaccggctgggctcccttccgcggcggccctctgcactacgccaagacccgccgc
gacgtgccgaaaacactggagcaactggccgaccgccacggcccccgcttcacccccgat
ccgggttggggcgaccttgtctga
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