Roseovarius indicus: RIdsm_02097
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Entry
RIdsm_02097 CDS
T06222
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_02097
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_02097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_02097
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_02097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Corona_6B_7B
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QEW26299
UniProt:
A0A0T5PD11
LinkDB
All DBs
Position
2243659..2244960
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AA seq
433 aa
AA seq
DB search
MDASSFAQRLAISGAMPRLSVGMASTVNIGFLAPLSGQAESWGLPGLHGCRIWEGWLNRA
GGLLIGGRRYPIRIHAHDCGSGPDEAHEGAVELVQGHDVKLMMMLGGDDYAAAGDYLTEK
RILTSTLLPSDLSPDTPYLIAPSEVHPVYVVTGVDWLTRTQPGLKTVALCAQKDGMGLPS
LATYRAAFKASGVEIVSEIQYPASGGDPAEIVGPMLEANPDILCWCTSYTPMVHAMTEYA
HARGFTGRILSCTFDHYDRLVGKLGAEFMEGVTFQFPDFDDPALREKAFFFNQPNVFYEE
FNNRYPGSWSAVSWEYAAILDIWHAAVEKAGTVNPVSVLAAMKQLGHVTHAFGSAEWWGN
ELFGIDNALVGDWPVVSIRGGKARIEEFGSVPDWLHAHGGALRREMVDLGQMWDQRLTGP
ARETKLGARTVAE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgagctttgcacagcgcctggcgatttccggtgccatgccaaggctttcg
gtcggcatggccagcacggtcaatatcggcttcctggcgccgctctcggggcaggccgaa
agctggggcctgccggggctgcatggctgccgcatctgggagggctggctgaaccgcgcg
ggcgggctgctgatcggcgggcgccgctatccgattcgcatccacgcccatgattgcggc
agcgggccggacgaggcccatgaaggcgcggtcgagctggtgcagggccacgacgtcaag
ctgatgatgatgctgggcggcgacgattacgccgccgcgggcgactacctgaccgaaaag
cgcatcctgacctcgaccctgctgccgtcggacctctcgcccgacacgccctacctgatc
gcgccgtccgaggtgcacccggtctacgtggtcaccggggtcgactggctgacccgcacg
cagccgggcctgaaaaccgtcgccctctgcgcccagaaagacgggatgggcctgccctcg
cttgccacctaccgcgcggccttcaaggcgtcgggggtcgagatcgtgagcgaaatccag
tacccggcctctggcggcgacccggcggagatcgtggggcccatgctcgaggccaacccg
gacatcctctgctggtgcacgagctatacgcccatggtccacgccatgaccgaatacgcc
catgcccggggcttcacgggccgcatcctctcctgcaccttcgaccattacgaccggctg
gtgggcaagctgggcgcggagttcatggaaggggtcaccttccagttccccgatttcgac
gacccggcgttgcgggaaaaggcgttcttcttcaaccagcccaacgtcttctacgaggag
ttcaacaaccgctaccccggaagctggtcggcggtgagctgggaatatgccgccatcctc
gacatctggcacgcggcggtggaaaaggccggcacggtgaacccggtctcggtgctggcg
gcgatgaaacagctcggccacgtgacccacgccttcggctcggccgaatggtggggaaac
gagcttttcggcatcgacaacgccttggtgggcgattggccggtggtgtcgatccggggc
ggcaaggcgcggatcgaggaattcggctcggtccccgactggctgcacgcccatggcggg
gcgctcaggcgcgagatggtcgatttgggccagatgtgggaccagcgcctgaccggcccg
gcccgcgaaaccaagctgggcgcgcggacggtggcggagtag
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