Roseovarius indicus: RIdsm_02163
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Entry
RIdsm_02163 CDS
T06222
Symbol
dctD_1
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein DctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rid
Roseovarius indicus
Pathway
rid02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RIdsm_02163 (dctD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rid02022
]
RIdsm_02163 (dctD_1)
Two-component system [BR:
rid02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
RIdsm_02163 (dctD_1)
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Sigma54_activ_2
Sigma54_activat
HTH_8
UPF0175
HTH_50
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QEW26364
UniProt:
A0A0T5P455
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Position
2320367..2321599
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AA seq
410 aa
AA seq
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MSVDVLVVDDDAAVRDALVQSLELADLTARPAGSFIEAKDHIAPDFPGVILSDIRMPGRD
GFYLLKYANGVDAELPVVLLTGEGDIPMAVEAMGQGAFDFLEKPCAPDDLIPVLQRALST
RRLVLENRRLKAQLQTGDPAARMLFGTSALADDLRARVRTVAPMGVEVLVTGPPGAGVSK
VAEVIHLMSPAARGPFVKRSSAGMDGVSLDQAFSAATGGTLFLDDVSALPGATQYALAEK
LEHAESVRLIAGTTADLSAEVEAGRMNAELYYRLDVTPVRIPALSERPEDIPVLFSHYVA
LAAEQAGIPVPEVTTDHMARLMAQDWPGNARSLMSAAMRFVLGMPEEAAAAAELGLAEQM
ARVERSLLIAALGRQNGRASEAAKALKLPRKTFYDKLARYGIRPDDYRRS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggatgtcctggttgtcgacgatgatgccgccgtgcgcgacgcgctggtccag
tcgctggaactggccgacctaacagcaaggcccgctggctcattcatcgaggcgaaggat
cacatcgctccggattttccaggcgtgatcctttccgatatccgaatgcccggccgtgac
gggttctaccttctgaaatacgctaacggtgtcgacgcggaactaccggtcgtgctgctt
acgggcgagggcgacattcccatggctgtcgaggccatggggcagggggcgttcgacttt
ctcgagaaaccctgtgcgcctgatgacctgataccggtgttgcaaagggccctgtcgacc
cggcgtctggttctggaaaaccgccgtctgaaggcgcagttgcaaacgggcgacccggcg
gcacggatgctgttcggcacctcggcgctggccgacgatctgcgcgcgcgggttcgcacg
gttgcgcccatgggcgtcgaggtgctggtcaccggtccgccgggcgcaggggtgtcgaag
gtggccgaggtcattcacctgatgtcgcccgcagcgcgcggccccttcgtgaaacgctct
tccgccgggatggacggggtgtcgctcgaccaggcgttcagcgcggccacgggcggaacg
ctgtttctcgacgatgtgtcggctctgccgggcgccacgcaatacgcgctcgccgaaaag
ctggaacacgcggaaagcgttcggctcatcgccggcaccacggccgacctgtcggcagag
gtcgaggccggacggatgaacgccgagctttactatcggctcgacgtgacgccggtccgc
atccctgcgctgtccgagcgtcccgaagatattccggtgctgttttcgcactacgttgcc
ctggcggcggaacaggccggcataccggtccccgaagtcacgaccgatcacatggcccgc
ctgatggcgcaggactggccgggaaatgcccggtcgctcatgtcggccgccatgcgcttc
gtgctgggcatgccggaagaggcggcggccgccgccgaactgggtctggcggaacagatg
gcacgggtcgaacgctcgttgctcattgccgcgcttgggcgccagaacggccgcgcgtcg
gaggccgccaaggcgctaaaactgccgcgcaagaccttttacgacaagctcgcccgctac
ggcatccgtcccgacgattaccgccgcagctga
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