Roseovarius indicus: RIdsm_02303
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Entry
RIdsm_02303 CDS
T06222
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
rid
Roseovarius indicus
Pathway
rid00906
Carotenoid biosynthesis
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RIdsm_02303
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rid01006
]
RIdsm_02303
Enzymes [BR:
rid01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
RIdsm_02303
Prenyltransferases [BR:
rid01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RIdsm_02303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
QEW26503
UniProt:
A0A0T5P8A1
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All DBs
Position
2456119..2456889
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AA seq
256 aa
AA seq
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MHEDVIACADLVRRGDPDRFRAVMAAPVPAREKLFPVYAFNLEVSRAPWVTEEPMIAEMR
LQWWRDALEEIRSGGPVRRHEVASPLSETVDAEGAELLDQLVAARRWDVYREPFEDLAHF
REYLGKTSSNLLLAAAGSLAEVPEDTVREAGYALGLANWLRAVPALEKAGRIPLVEGTHA
AIRSLAEEGLDHLASARSARGSIPKPARPALLVMWQVGPVLKAARDDPGRVGDGLLDPAP
FRSRLELMARAATGMW
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagacgtcatcgcctgtgccgatctggtgcgccggggcgatcctgaccgcttt
cgcgcggtgatggcggcgcctgtgcccgcgcgcgaaaagctgtttccggtctatgccttc
aacctcgaggtgtcgcgggcgccgtgggtgacggaagagccgatgattgccgagatgcgc
ctgcaatggtggcgcgatgcgctggaggaaatccgctcgggcgggccggtgcggcggcac
gaggtggcgagcccgctgagcgagacggtcgatgccgaaggtgcggaactgctggatcag
ctggttgccgcgcggcggtgggatgtctaccgggagcccttcgaggatctggcgcatttc
cgggaatacctgggcaagacgtcgtccaacctgttgctggcggcggccgggtcgctggcc
gaggtgccggaggatacggtgcgggaggcgggctatgcgctggggctggccaactggctg
cgggcggtgccggcgctggaaaaggcggggcgcattccgctggtcgaaggcacacacgcg
gcgatccggtcgctggcggaagaggggctcgaccacctggccagtgcccggtcggcgcgc
ggcagtatcccgaaaccggcgcggcccgccttgctggtgatgtggcaggtcgggccggtg
ctgaaggcggcgcgggacgacccggggcgcgtgggtgacgggctgctcgacccggcgccg
tttcgcagccggctcgagcttatggcgcgggcggccacggggatgtggtag
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