Roseovarius indicus: RIdsm_02312
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Entry
RIdsm_02312 CDS
T06222
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rid
Roseovarius indicus
Pathway
rid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIdsm_02312 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_02312 (alkA)
Enzymes [BR:
rid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RIdsm_02312 (alkA)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RIdsm_02312 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QEW26512
UniProt:
A0A0T5P8G6
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All DBs
Position
2464799..2465428
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AA seq
209 aa
AA seq
DB search
MTGRIIETSADVEEGADYLERVCPRLAHARQLTGPLPLRRKPDGFAQLLSAIVSQQVSIA
SAAAIWGRMKAAGLTGPRKIMWASDDDLRAVGLSRQKIRYARALAEARIDFKGLRGKPDA
EVVATLTEVPGIGVWTAEIYAMFSLGRADVFAPGDLALQEAARVLYDLPERPKDRELRAM
AEAWSPWRSVAARLLWAYYRVDKQREGIR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgggcggatcatcgagacgtcggcggatgtcgaggagggtgcggattacctcgag
cgcgtctgcccgcggctggcgcatgcgcggcagctgacggggccgctgccgctcaggcgg
aagccggacgggtttgcccaacttttgagcgccatcgtcagccagcaggtgagcatcgcg
tcggccgcggccatctggggccggatgaaggctgccgggctgaccgggccgcgcaagatc
atgtgggcgagcgacgacgatctgcgggccgtggggctgagccggcagaagatccgctat
gccagggcgctggcggaggcgcggatagatttcaaggggttgcggggcaaacctgatgcg
gaggtcgtggcgacgctgaccgaggtgccgggcatcggcgtgtggacagcggagatctac
gcgatgttcagccttggccgggcggacgtgttcgcgcccggtgacctggccctgcaggag
gcggcgcgggtgctttacgatctgccggagcggccgaaggaccgggagttgagggcgatg
gccgaggcgtggagcccgtggagatcggttgcggcgcggcttttgtgggcctactaccgg
gtggacaaacaaagggaagggatcagatga
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