Roseovarius indicus: RIdsm_02417
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Entry
RIdsm_02417 CDS
T06222
Symbol
oprF_4
Name
(GenBank) Root adhesin
Organism
rid
Roseovarius indicus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QEW26617
UniProt:
A0A0T5P8C7
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Position
2563962..2565809
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AA seq
615 aa
AA seq
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MKRNWFKSTTAIVLVIGLAAPHGAIAQSAENDTTGLTLEGTADSVGKQVDNLGNALGLGN
QNNQQDDSGQAQQNQAQGNAQTEANTETQAQGNANAQAEGNANAQADGNANAQAEGNVNA
QAQGNAEQGGQNNQAENLRQKLEEQQQKVQERVQKQQEKVQERVEKRQERAEERNEQAQQ
TADQLENALQNNNQDDGTTNADADAVATQNADANQNADANANANAQANVDEDLAEEARQK
AQQDNVEQLSAKEQAEQAAQTAADTGAAALSGVGELVDRAQETVTEQQARSSNEEFQTDA
AGERRANARANARAAAQADDDDNLAEVLGAAAVGALGAYMVGQSFEGGGQVVSNTGDRVV
VEQDGQYRVIRDDNALLRRPGSQVETETYNDGSTRTIIDHEDGSRVVTVRSGNGAILRRT
LIRPDGQEIVLIDDTRQYSDVDVTRLEQQQAQQVDYNASETDQLRAALAANSGSMDRAYS
LNQVRNIAVVRNQVPVISLDSINFETNSAVIQPEEAEELQALGDAMRQAIEENPQQLFLV
EGHTDTVGRAAYNLALSDRRAESVALALTEYFNVPASNLIVQGYGESDLKVRETGDIREN
RRAAVRNITPLLNGG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaactggttcaaatcgaccacagccatcgtactggtcatcgggcttgcagcc
ccgcatggagcgatcgcgcaaagcgcggagaacgacaccaccgggcttacccttgagggt
actgccgacagcgttggcaagcaggtcgacaacctcggcaacgcgctggggcttggcaac
cagaacaaccagcaggatgattccggtcaggcgcagcagaaccaggcccagggcaatgcc
cagaccgaggccaataccgagacgcaggcgcagggcaatgcgaacgcacaagccgagggc
aacgccaacgcccaggccgacggcaacgcgaacgcccaggccgagggcaatgtcaatgcg
caggcgcagggcaatgccgagcagggtggccagaacaaccaggccgaaaacctgcgtcag
aagctcgaagagcagcagcagaaggtgcaggagcgcgttcagaagcagcaggaaaaggtt
caggagcgcgtcgagaagcgccaggaacgggcggaagagcgcaacgagcaggcgcagcag
accgccgaccagcttgagaacgcgctgcagaacaacaaccaggacgatggcacgaccaat
gccgacgctgacgcggttgcgacccagaatgccgatgcgaaccagaacgccgatgcaaat
gccaatgcaaacgcacaggccaatgtcgacgaggacctggcggaagaggcgcggcagaag
gcgcagcaggacaatgtcgaacagctgagcgcgaaggagcaggccgagcaggccgcgcag
accgccgccgacaccggcgcggcggccctgagcggcgtgggcgagcttgtggaccgggcc
caggaaacggtgaccgaacagcaggcgcgctcgtcgaacgaggagttccagaccgatgcc
gccggcgagcggcgtgcgaatgcccgcgccaacgcccgggccgccgcgcaggccgatgac
gacgacaacctcgccgaggttctgggcgcggccgccgtgggcgcgcttggcgcctacatg
gtcggccagtccttcgagggcggcgggcaggtcgtctccaacaccggcgaccgggtggtt
gtcgagcaggacggccagtaccgggtgatccgcgacgacaacgcgcttctgcgccgtccg
ggcagccaggtcgagaccgagacctacaatgacggctcgacccgcaccatcatcgaccac
gaggacggcagccgcgtcgtcaccgtgcgctcgggtaatggcgcgatcctgcgccgcacg
ctgatccggcccgacgggcaggagatcgtgctgatcgacgacacgcgccagtatagcgac
gtcgacgtcacccggctggaacagcagcaggcgcagcaggtggattacaacgcgtcggag
accgaccagctgcgcgccgcgctggctgcgaacagtggcagcatggaccgcgcctattcg
ctgaaccaggtgcgcaacatcgccgtggtgcgcaaccaggtgccggtgatctcgctcgac
tcgatcaatttcgagaccaactcggccgtgatccagccggaagaggccgaggagctgcag
gcgcttggcgatgcgatgcggcaggcgatcgaggagaacccgcagcagctgttcctcgtc
gagggccacaccgacacggtgggccgcgccgcctataaccttgcgctgtcggaccgccgg
gcggaatcggtggcgctggcgctgaccgagtatttcaacgtgcccgcgtcgaacctgatc
gttcagggttacggggaatccgacctgaaggtgcgcgagaccggtgacattcgcgagaac
cgtcgcgccgccgtgcgcaacatcacgccgcttctgaacggcgggtaa
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