Roseovarius indicus: RIdsm_02811
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Entry
RIdsm_02811 CDS
T06222
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rid
Roseovarius indicus
Pathway
rid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RIdsm_02811 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_02811 (xseB)
Enzymes [BR:
rid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RIdsm_02811 (xseB)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RIdsm_02811 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TMCO5
ARM_TT21_5th
RPW8
DUF3496
DUF601
L27_2
Motif
Other DBs
NCBI-ProteinID:
QEW27002
UniProt:
A0A0T5PAU8
LinkDB
All DBs
Position
complement(2935472..2935714)
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AA seq
80 aa
AA seq
DB search
MSDTPVSEMSFEEAMKELEQVVSKLERGDVALEDSIKLYERGAELKKRCETKLKEAEEKV
AAITLDGEGNPTGTAPVENM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatactcccgtttccgaaatgtccttcgaagaggccatgaaagagctcgaacag
gtggtcagcaagctggagcggggcgacgtggcgctggaggattccatcaagctctacgag
cgcggggccgagctgaagaagcgctgcgagaccaagctgaaggaagccgaggagaaggtt
gccgcgatcacgctcgatggagagggcaacccgaccgggactgccccggtcgagaatatg
tga
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