Roseovarius indicus: RIdsm_02883
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Entry
RIdsm_02883 CDS
T06222
Name
(GenBank) Putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rid
Roseovarius indicus
Pathway
rid00630
Glyoxylate and dicarboxylate metabolism
rid00680
Methane metabolism
rid01100
Metabolic pathways
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIdsm_02883
09102 Energy metabolism
00680 Methane metabolism
RIdsm_02883
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RIdsm_02883
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_8
Fer4_2
Fer4_21
Fer4_18
Fer4_16
Fer4_4
TPP_enzyme_M
TetR_C_34
Motif
Other DBs
NCBI-ProteinID:
QEW27074
UniProt:
A0A0T5PAN6
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Position
3010914..3013808
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AA seq
964 aa
AA seq
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MKDFIIPDDRDMGTPAKTGAPVTLTVDGFEVTVPEGTSVMRAAAEAGISVPKLCATDSLE
AFGSCRLCVVEIEGRRGTPASCTTPVAPGMAVRTQSDKVRKVRKGVMELYISDHPLDCLT
CAANGDCELQDMAGAVGLRNVRYKAPDNGGLANHFETRDSSGETNPEWLPKDDSNPYFTY
DPSKCIVCNRCVRACEEVQGTFALTIEGRGFDSRVSAGAASDDFLSSDCVSCGACVQACP
TATLQEKSVIEMGTPDRSVVTTCAYCGVGCTFKAELQGDELVRMVPYKHGKANRGHSCVK
GRFAYGYAHHKDRILSPMIRDRVDEPWREVGWEEALSFAAGKLRGLQETHGRKSIGVITS
SRCTNEETYLVQKLARSVFGNNNTDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEQTDV
VIVIGANPTDGHPVFASRLKKRLRAGAKLIVIDPRRIDLVKSAHIGAAHHLPLRPGTNVA
VVTALAHVIVTEGLMDEDFIRTRCDWEEFQEYAAFVTDPRHSPEATALLTGVDPQELRAA
ARLFATGGNGSIYYGLGVTEHSQGSTTVMGIANLAMLTGNMGRPGVGVNPLRGQNNVQGS
CDMGSFPHELPGYRHVKNADVREMFEAVWGTEIDPEPGLRIPNMLDAAVDGTFKGLYCQG
EDILQSDPDTRHVAAGLAAMECVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRI
NRVREVMKPLNGHADWEVTQLLANAMGAGWHYTHPAQIMNEIAATTPSFAGVDYALLEEK
GSVQWPCNEAHPEGTPLMHVDGFVRGKGRFIVTEYVATDERTGPRFPLLLTTGRILSQYN
VGAQTRRTANVVWHDGDLLEIHPHDAENRGVTEGDWVKLASRSGETALRATITDRVSPGV
VYTTFHHPDTQANVITTDFSDWATNCPEYKVTAVQVSASNGPTDWQEDYAAQAAQARRIL
PAAE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatttcatcattcccgacgaccgcgacatgggcacacccgccaagacaggcgcg
ccggtgacgcttaccgtggacgggttcgaggtgaccgtgcccgagggcaccagcgtgatg
cgggctgcggccgaggccggaatctcggtgcccaagctctgcgccacagacagtctcgag
gcgttcggctcgtgccggctctgcgtcgtggagatcgaagggcggcggggcacgccggcc
tcctgcaccacgccggtcgcgccgggcatggccgtgcgcacccagtctgacaaggtccgc
aaggtccgcaagggtgtgatggagctttacatctccgaccacccgctcgactgcctgacc
tgcgcggccaacggcgattgcgaactgcaggacatggccggcgccgtgggcctgcgcaac
gtgcgttacaaggcgccggacaatggcggcttggcgaaccatttcgaaacgcgcgacagc
tcgggcgagaccaacccggaatggctgcccaaggacgacagcaacccctatttcacctac
gacccttccaagtgcatcgtgtgcaaccgatgtgtccgcgcctgcgaggaagtccagggc
acatttgccctgacgatcgaaggccgcggctttgacagccgggtgagcgcgggcgcggcg
tcagacgatttcctgtcgtcggattgcgtgagctgtggcgcctgcgtgcaggcctgcccg
acggccaccttgcaagagaaatcggtgatagagatgggcacgccggaccggtcggtggta
accacctgcgcctattgcggggtgggctgtaccttcaaggccgagctgcaaggcgacgag
ctggtgcgcatggtgccctacaagcacggcaaggcgaaccggggccattcctgcgtgaag
gggcgctttgcctatggctatgcccaccacaaggaccggatcctgtccccgatgatccgc
gaccgggtggacgagccgtggcgcgaggtcggctgggaagaggcgctgagctttgccgcc
ggcaaactgcgcgggctgcaggagacccacggcaggaaatccatcggcgtcatcacctca
agccgctgcaccaatgaggaaacctacctggtgcagaagctggcgcgctcggttttcggc
aacaacaacaccgatacctgtgcgcgggtctgccattcgcccacgggctatgggctgggc
cagaccttcggaacatccgccgggacacaggatttcgactcggtcgagcagacggacgtg
gtgatcgtgatcggcgccaacccgaccgacggtcacccggttttcgcctcgcggctcaag
aaacgcctgcgcgccggggccaagctgatcgtgatcgacccgcgccggatcgacctggtg
aaatctgcgcatatcggcgcggcgcatcacctgcccctgcggcccggcaccaacgtggcc
gtggtcacggcgctggcacatgtgatcgtgaccgaagggctgatggacgaggatttcatc
cgcacccgctgcgactgggaggagttccaggaatatgcggcctttgtcaccgacccgcgc
cacagccccgaggcgacggcactgctgacgggggtcgacccgcaggagctgcgcgccgcc
gcccggctgttcgccaccggcgggaacgggtcgatctattacgggctcggcgtgaccgag
cacagccagggctcgaccaccgtcatgggaatcgccaacctcgccatgctcaccggcaac
atgggccggcccggcgtgggggtgaacccgcttcggggacagaacaacgttcagggctcg
tgcgacatggggtccttcccccatgaattgccgggctatcgccacgtgaagaacgccgat
gtgcgcgagatgttcgaggccgtctggggcaccgagatcgaccccgagccggggctgcgc
attcccaacatgctggacgccgccgtcgacgggacgttcaagggcctctactgtcagggc
gaggacatcctgcaatctgatcccgacaccaggcatgttgcggcggggctcgcggcgatg
gaatgcgtcatcgtgcatgaccttttcctcaacgaaaccgccaattacgcgcatgtcttc
ctgcccggttcgacctttctcgagaaggacggcacgttcaccaatgccgagcgccggatc
aaccgggtgcgcgaggtgatgaagccattgaacggccatgccgactgggaggtgacgcag
ctgctggccaatgcgatgggggcgggttggcattacacgcacccggcgcagatcatgaac
gagatcgccgcgacgaccccgtccttcgccggagtggattacgcgctgctggaggagaag
ggcagcgtgcagtggccctgcaacgaggcacaccccgagggaacgccgctcatgcatgtc
gacgggttcgtgcgcggcaagggacggttcatcgtcaccgaatacgtggccaccgacgag
aggaccgggccacgctttccgctcctgctcaccacggggcggatcctgtcgcagtataac
gtcggcgcccagacgcgacgcactgcgaacgtggtctggcatgacggcgacctgctggag
atccatccgcacgacgccgaaaaccgcggtgtgaccgagggcgattgggtgaaactggcg
tcgcgttccggcgagaccgccctgcgcgccacgatcaccgaccgggtcagcccgggggtt
gtctacaccaccttccaccatcccgacacgcaggccaacgtgatcaccaccgacttctcg
gactgggcgaccaactgcccggaatacaaggtgacggcggtgcaggtcagcgcgtcgaac
gggccgacggactggcaggaagactatgccgcgcaggccgcgcaggcacgccgcatcctg
ccggcagcggagtga
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