Roseovarius indicus: RIdsm_02917
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Entry
RIdsm_02917 CDS
T06222
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_02917 (phrA)
Enzymes [BR:
rid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RIdsm_02917 (phrA)
DNA repair and recombination proteins [BR:
rid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RIdsm_02917 (phrA)
Prokaryotic type
RIdsm_02917 (phrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Baculo_gp64
Motif
Other DBs
NCBI-ProteinID:
QEW27107
UniProt:
A0A0T5PAI6
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Position
complement(3043488..3044912)
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AA seq
474 aa
AA seq
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MSDNRPTILWLRRDLRLSDHPALVAAVERGGPVIPVFIRDDSVDRLGAAPRWRLGLSLED
LAARLADKGSRLIFRAGPAREVLRDLVKEAGAGAVYWSRLYDPEAIERDTDVKSLLKDEG
IEAESFEGHVLFEPWTVETGQGGYYKVYSPMWRAVKDREVPEALSTPSKIPAPESWPESD
KLEDWQLGAAMNRGAAVCLPHQRVGEEAAQGRLGWFAGHAIGDYKTGRNMVADEGCSGLS
ENLTYGEISPRQCWHAGWRAVEEGAEGAETWVKELVWREFAYHLIYHTPQITERNWREGW
DRFPWEEKEDRQSVLRWKQGRTGVPFVDAAMREMYVTGKMHNRARMIVASYLTKHMMTHW
EIGKRWFEDCLTDWDPASNALGWQWTAGCGPDAAPYFRIFNPETQAEKFDKDGTYRRRWI
AEGQSRPTKTALSYFEAIPRSWGLSPDDAYPGEPVVGLQEGRKQALAAYEARDF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaccgaccaacaatcctgtggctgaggcgtgatctgcggctgagcgaccat
ccggcgctggtggcggcggtggagcgcggcgggccggtcattccggtcttcatccgcgat
gacagtgtcgaccggctgggcgccgcaccgcgctggcggctgggcctgtcactggaggac
ctggcggcgcggctggcggacaagggcagccggctcatcttccgggcggggcctgcacgc
gaggttctgcgggacctggtcaaggaggccggggcaggggcggtctattggtcgcggctc
tatgatccagaggcgatcgaacgggacacggatgtcaaatctctgctgaaggacgagggc
atcgaggcggaaagcttcgaaggccacgtgctgttcgagccgtggacggtcgagaccggg
cagggcgggtactacaaggtttactcccccatgtggcgcgccgtgaaggatcgcgaggtg
cccgaggcgctgtcgaccccgtcgaagatacccgcgcccgaaagctggccggagagcgac
aagctggaagactggcagcttggcgccgcgatgaaccggggcgccgccgtgtgcctcccg
catcagcgcgtgggcgaggaggccgcgcagggccggctgggctggttcgcgggccatgcc
atcggcgactacaagacgggccgcaacatggtggccgacgagggctgctccggcctgtcg
gagaacctgacctatggcgagatttccccgcgccagtgctggcatgccgggtggcgggcc
gtggaggagggcgccgagggggccgagacctgggtcaaggaactcgtctggcgcgagttc
gcctatcacctgatctatcacacaccccagatcaccgaacgcaactggcgcgaggggtgg
gaccgcttcccgtgggaggagaaggaagaccgccagagcgtgctgcgttggaagcagggc
cgcacgggggtgccctttgtcgatgccgccatgcgcgagatgtacgtgaccggcaagatg
cacaaccgtgcccggatgatcgtggcaagctacctgaccaagcacatgatgacccattgg
gagatcggcaagcgctggttcgaggactgcctgaccgattgggacccggccagcaacgcg
ctcggctggcaatggacggccggctgtggccccgatgccgcgccctatttccgcatcttc
aaccccgagacgcaggccgagaagttcgacaaggacggaacctatcgccgccgctggatc
gccgaggggcaatcgcgcccgacgaagaccgcactgtcctatttcgaggccatcccgcgc
agttggggcctgtcgcccgacgatgcctacccgggcgagccggtggtcgggctgcaagag
ggcagaaagcaggcgctggcggcctacgaggcgcgggacttttga
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