KEGG   Roseovarius indicus: RIdsm_03256
Entry
RIdsm_03256       CDS       T06222                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rid  Roseovarius indicus
Pathway
rid00470  D-Amino acid metabolism
rid00550  Peptidoglycan biosynthesis
rid01100  Metabolic pathways
rid01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rid00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RIdsm_03256 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RIdsm_03256 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RIdsm_03256 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rid01011]
    RIdsm_03256 (ddl)
Enzymes [BR:rid01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RIdsm_03256 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:rid01011]
 Precursor biosynthesis
  Amino acid ligase
   RIdsm_03256 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATPgrasp_ST ATP-grasp_3
Other DBs
NCBI-ProteinID: QEW27440
UniProt: A0A0T5P4T4
LinkDB
Position
complement(3388522..3389400)
AA seq 292 aa
MGGPSAEREVSLSTGRECAAALREAECNVIEVDAGRDLSERLAEISPDVVFNALHGRWGE
DGCVQGMLEWLQIPYTHSGVLASALAMDKQKTKAAYVAAGLPVVDSIIAPAKEVKRRHVM
EPPYVVKPNNEGSSVGVYLVREAANTPPQLSDDMPEQVMVEQYVAGRELTTSVMGDRALT
VTDIITEGWYDYHAKYAEGGSRHEVPAQVPQEIFDACMDYAMRAHNILGCRGLSRTDFRW
DESRGLDGLVLLETNTQPGMTPTSLSPEQAQKVGISFPELCRWLVEDASCNR
NT seq 879 nt   +upstreamnt  +downstreamnt
atgggcggcccgtcggccgagcgagaggtctcgctgtcgacagggcgggaatgcgccgcc
gcgttgcgggaagcggaatgtaacgtgatcgaggtcgatgccggccgcgatctttccgag
cgtttggccgagatttcccccgatgtcgtcttcaacgcgctgcatggccggtggggcgag
gacggctgtgtgcaggggatgctggaatggctgcagatcccctatacccattcgggcgtg
ctggcctcggcgctggcgatggacaagcagaagaccaaggcggcttatgtcgccgccggg
ttgccggtggtcgacagcatcatcgcgccggccaaggaagtgaagcggcggcacgtgatg
gagccgccctacgtggtcaagccgaacaacgaggggtcttccgtcggggtgtatctcgtg
cgcgaggccgcgaacacgccgccgcaattgtcggacgacatgcccgagcaggtgatggtc
gagcaatacgtggcgggccgggagctgacgacgtcggtgatgggcgaccgggcgctgacg
gtgacggatatcatcaccgagggctggtacgactatcacgcgaaatatgccgagggcggg
tcgcgtcacgaggtgccggcgcaggtgccgcaggagatcttcgatgcctgcatggactat
gcgatgcgggcgcataacattctgggctgtcgcgggctcagccggaccgattttcgctgg
gacgaaagcagggggctcgacggtctcgtgcttctggaaaccaatacgcagccgggcatg
acgcccacctcgctgtcgcccgagcaggcgcagaaggtggggatttcgttcccggagctg
tgccgctggctggtggaggatgcgtcgtgcaacaggtga

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