Roseovarius indicus: RIdsm_03365
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Entry
RIdsm_03365 CDS
T06222
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rid
Roseovarius indicus
Pathway
rid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RIdsm_03365 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_03365 (uvrB)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIdsm_03365 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RIdsm_03365 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
TrwB_AAD_bind
AAA
eIF3_p135
Kinesin
Ish1
Motif
Other DBs
NCBI-ProteinID:
QEW27549
UniProt:
A0A0T5P852
LinkDB
All DBs
Position
3486077..3488278
Genome browser
AA seq
733 aa
AA seq
DB search
MPYAHSDKSEPLMHAPAPDVKHRDKLEGGKRFVMATEFQPAGDQPTAIAELSQGVDSGER
DQVLLGATGTGKTFTMAKVIAETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYY
DYYQPEAYVPRSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLKVGGEYDQRQVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIWPAHLEDRAWK
LSFFGEELESITEFDPLTGAKTGTFEHIRVYANSHYVTPKPTMQQAIIGIKKELRTRLDQ
LVGEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAAWELEQTGGVFTEQVIRPTGLLDPQVEIRPVDMQVDDLLDEVRRVTEAGYRTLVTT
LTKRMAEDLTEYLHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERAMGETERRRA
KQIAYNEEHGITPATIRKNVDDILSGLYQGDVDMNRVTAKIEKPMAGANLQAHLDGLRTD
MRKAAENLEFEEAARLRDEIKRLEAVDLAVHDDPLARQQAVEKASDAAVGARGRSTAGRP
GQRGGNVQRRKKH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccctatgcccactcagacaagtcggagccgctcatgcacgcgccggcgccggacgtg
aaacaccgcgacaagctggaaggcggcaagcggttcgtgatggcgaccgagttccagccg
gcgggcgaccagcccacggccattgccgagctgtcgcagggcgtcgacagcggcgagcgc
gaccaggtgctgctgggcgccacggggaccggcaagaccttcaccatggccaaggtcatc
gcggaaacccagaggccggcgatcattctcgccccgaacaagacgctggcggcccagctc
tacggtgagttcaagggcttcttccccgacaacgccgtggagtattttgtcagctattac
gactactaccagcccgaagcttatgtgccgcgctcggatacctatatcgagaaagaaagc
cagatcaacgaacagatcgaccgcatgcgccactcggccacgcgggcgctgctggagcgc
gacgacgtgatcatcgtcgcctcggtctcgtgtatctacggcatcggctcggtcgagacc
tacggggcgatgacccaggatctaaaggtgggcggcgagtatgaccagcggcaggtgatg
gccgacctcgtggcgcagcagtaccgccgcaacgaccaggccttccagcggggcagcttc
cgggtgcgcggcgacagcctcgagatctggcccgcccacctcgaagaccgggcgtggaag
ttgagcttcttcggcgaggagcttgaatcgattaccgaattcgatccgctcaccggcgcc
aagaccggcacgttcgagcatatccgggtctatgcgaattcccactacgtgacgcccaag
ccgacgatgcagcaggcgatcatcggcatcaagaaggagctgcgcacgcggctcgaccag
ctggtgggcgaaggcaagctgctggaggcgcagcggctggagcagcgcacgaatttcgac
ctcgagatgctggaggcgacgggcgtctgcaacggcatcgagaactactcacgctacctg
acgggccgcgccccgggcgagccgccgccgacgctgttcgagttcatccccgacaacgcc
attgtcttcgccgacgaatcccacgtctctgtgccgcagatcggcggcatgtacaggggc
gactaccggcgcaagttcacgctggccgaacatggcttccgcctgccgtcgtgcatggac
aaccgtcccctcaagttcgaggaatgggacgcgatgcgcccgcaatcggtgttcgtgtcg
gccacccccgccgcctgggagctggagcagaccggcggcgtctttaccgaacaggtgatc
cggcccaccggtctgcttgatccgcaggtggaaatccggcccgtcgacatgcaggtcgac
gacctgctcgacgaggtgcggcgggtgacggaggcgggctatcgcacgctggtgacgacg
ctcacaaagcggatggcggaggacctgaccgagtacctgcatgaacagggcatcaaggtg
cgctacatgcactccgacatcgatacgcttgaaagaattgagattcttcgcgatctgagg
ctgggtgccttcgacgtgctggtggggatcaacctgctgcgcgaggggctcgacattccg
gaatgcgggctggtggcgatcctcgatgcggacaaggaagggtttcttcgctccgagacc
tcgctgatccagaccatcgggcgtgccgcgcggaacgccgacgggcgggtcatcatgtat
gccgaccggatcaccggctcgatggaacgggcgatgggtgagaccgagcggcgtcgggcc
aagcagatcgcctataacgaagagcacgggatcacccccgccacgatccgcaagaatgtc
gacgatatcctgtcgggcctctaccagggcgatgtggacatgaaccgcgtgaccgcgaag
atcgagaagccgatggccggtgccaacctgcaggcgcatctcgacgggctgcgcaccgat
atgcgcaaggcggccgagaacctcgaattcgaggaagcggcgcgcctgcgcgacgagatc
aagcggcttgaagccgtcgaccttgcggtgcacgacgaccccctggcccggcagcaggcg
gtcgagaaagcctcggacgccgccgtgggcgcgaggggccgatcgaccgccggacggccc
ggccagcgcggcggcaacgtacagcggcgcaagaagcactga
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