Roseovarius indicus: RIdsm_03558
Help
Entry
RIdsm_03558 CDS
T06222
Symbol
valS
Name
(GenBank) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rid
Roseovarius indicus
Pathway
rid00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RIdsm_03558 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rid01007
]
RIdsm_03558 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rid03016
]
RIdsm_03558 (valS)
Enzymes [BR:
rid01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RIdsm_03558 (valS)
Amino acid related enzymes [BR:
rid01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RIdsm_03558 (valS)
Transfer RNA biogenesis [BR:
rid03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RIdsm_03558 (valS)
Prokaryotic type
RIdsm_03558 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
DUF386
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
QEW27739
UniProt:
A0A0T5P7T2
LinkDB
All DBs
Position
3674051..3677134
Genome browser
AA seq
1027 aa
AA seq
DB search
MAMDKTFDAAEAEGRIYDAWENSGAFKAGANAADGAETFSIMIPPPNVTGSLHMGHAFNN
TLQDILIRWHRMKGHDTLWQPGQDHAGIATQMVVERRLAEEGNESRREMGREKFLEKVWE
WKTQSGGTIINQLKRLGASCDWSRNAFTMSGAPGAPEGEDGNFHDAVIKVFVDMYDKGLI
YRGKRLVNWDPHFETAISDLEVENTETHGHMWHFKYPLAGGETYTYVERDEHGKVLFEEE
RDYISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCEIPVGPKEHRRMIPIITDDYPDP
SFGSGAVKITGAHDFNDYGVAKRGNIPMYRLMNTSAHMRSDGADYATCATRAQDIANGSD
FTIEEVDTLNLVPDDLRGLDRFEARKKVVEQITSEGLAVEVVNDQGEPEPFVENKLIMQP
FGDRSKVVIEPMLTDQWFVDTQKIVGPAIDSVRKGEVNIMPEQDRKVYFHWLENIEPWCI
SRQLWWGHQIPVWYGFDLSSPGFHDDEGDGTLDLVEMLRLLNEGHNSYLMECAPDFDAIT
DAYHDKLASLPVPLQAMQVVEVKSRDEALHRLAESLAEYTASQDPTHLVYPVWQDPDVLD
TWFSSGLWPIGTLGWPEDTPELQKYFPTSVLVTGFDIIFFWVARMMMMQYAVVGQRPFDH
VYVHALVRDEKGKKMSKSLGNVLDPLELIEEYGADAVRFTLTAMAAMGRDLKLSTQRIAG
YRNFGTKLWNAARFAEMNGATGSDGTTPQPTATVNRWIVGETAKVRLEVDTALEQFRFND
AANALYAFVWGKVCDWYVEFSKPLLLDGDEATKAETQATMAWVIDQCLVLLHPIMPFITE
ELWGTLGKREKMLVHADWPTYGEELIDRDADREMNWVIDLIDSIRSARAQVHVPVGLHIP
MLVTEIDGAAKAAWDRNEVMIKRLARIDSLTPTDALPKGCITVPADGASFGLPLADVIDV
EEEKARLEKTLGKLEKELGGLRGRLNNPKFVESAPDDVVEEARENLRAREEEEAKIRAAL
DRLAELG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggacaagacattcgacgcagcagaggccgagggccgcatctacgacgcctgg
gagaactccggcgccttcaaggccggcgcaaacgccgccgacggggccgagaccttctcg
atcatgatccccccgcccaacgtgacgggctccctccacatgggccacgccttcaacaac
acgctgcaggatatcctgatccgctggcaccgcatgaaaggccacgacacgctctggcag
ccggggcaggaccatgccggcatcgccacccagatggtcgtcgaacgccgcctcgccgag
gaaggcaacgaatcccgccgcgagatgggccgcgagaaattcctcgaaaaggtctgggaa
tggaaaacccagtccggcggcaccatcatcaaccagctcaagcgcctcggcgcctcctgc
gactggtcgcgcaacgccttcaccatgtccggcgcccccggcgcgcccgagggcgaagac
ggcaatttccacgatgccgtcatcaaggtcttcgtcgacatgtacgacaagggcctcatc
taccgtggcaagcggctggtgaactgggacccgcatttcgagaccgccatctccgatctc
gaggtcgagaacaccgagacccacggccacatgtggcacttcaaatacccgctcgcgggc
ggcgaaacctacacctatgtcgagcgtgacgagcacggaaaggtgctcttcgaggaagag
cgcgactatatctccatcgccaccacgcgccccgaaaccatgctgggcgacggcgccgtc
gcggtccacccgtcggatgagcgttacgcgccaatcgtcggaaaactctgcgaaatcccc
gtcggcccgaaagagcatcggcgcatgatcccgatcatcaccgacgactaccccgacccc
tccttcggctcgggcgcggtcaagatcaccggcgcgcatgacttcaacgactatggcgtc
gccaagcgcggcaacatccccatgtaccgcctgatgaacaccagcgcccacatgcgctcg
gacggggccgattacgccacctgcgccacgcgcgcccaggacatcgccaacggcagcgac
ttcaccatcgaggaggtcgacaccctcaacctcgtccccgacgacctacgcggtctcgac
cggttcgaggcccgcaagaaggtcgtcgaacagataacaagcgaaggtttggccgtcgaa
gttgtaaatgatcaaggcgagcccgagccgtttgtggaaaacaagctgatcatgcagcct
tttggtgatcgctcgaaggtcgtgatcgagccgatgctcaccgatcaatggttcgtcgac
acccagaaaatcgtcggcccggccatcgactccgtccgcaagggcgaggtcaacatcatg
cccgagcaggaccgcaaggtttacttccactggcttgaaaacattgaaccttggtgcatt
tcacgccagctctggtggggccaccagatccccgtctggtacgggttcgacctctccagc
cccggcttccatgatgacgagggcgacggcacgctcgaccttgtcgagatgctgcgcctg
ctgaacgaggggcataacagctacctgatggagtgtgcgcctgattttgacgcgattaca
gacgcttaccacgacaagctcgcgtcgctcccggtaccgcttcaggccatgcaggtggtc
gaggtcaaatcgcgcgacgaggccctgcaccgactcgccgaaagcctggccgaatacacc
gcatcgcaggatcccacgcaccttgtctaccccgtctggcaagaccccgacgtgctcgac
acgtggttctcctccggcctctggccgatcggcacgctgggctggcccgaagacacgccc
gagctgcaaaaatactttccgaccagtgtcttggtgaccggctttgacatcattttcttc
tgggtcgcccggatgatgatgatgcaatatgccgtcgtcgggcagcgccccttcgatcac
gtctatgtccacgccctcgtccgcgacgagaagggcaagaaaatgtcgaagtcgctgggc
aacgtgctcgacccgctcgagctgatcgaggaatacggcgccgacgccgtgcgcttcacc
ctcacggccatggccgccatgggccgcgacctgaagctttcgacgcaacgcattgcagga
tatcggaatttcggcaccaagctctggaacgccgcccgctttgccgagatgaacggcgcg
accgggtccgacggcacgacgccccagcccaccgccacggtgaatcgctggatcgtcggc
gaaaccgccaaggtgcgcctcgaggtcgacaccgcgctcgagcaattccgcttcaacgac
gcggccaacgccctctatgccttcgtctggggcaaggtctgcgactggtatgtcgaattc
tccaagccgctcctgcttgacggcgacgaggccaccaaggccgagacacaggcgacgatg
gcctgggtcatcgaccagtgcctcgttctcctgcatccgatcatgcccttcatcactgaa
gagctttggggaaccctcggaaaacgcgagaaaatgctcgttcacgccgattggcccacc
tacggcgaagagctgatcgaccgcgacgccgaccgcgagatgaactgggtcatcgacctg
atcgactcgatccgctcggcccgcgcccaggtgcatgtgccggtcggtctccacatcccc
atgctggtgaccgaaatcgacggggccgccaaggccgcgtgggaccgcaacgaggtgatg
atcaagcgcctcgcccgcatcgacagcctgacgcccacggatgccctgcccaagggctgc
atcaccgtccccgccgacggcgccagcttcggccttccgctcgccgacgtcatcgacgtg
gaagaggaaaaagcccggctcgaaaagaccctcggcaagctcgagaaggaactgggcggc
ctgcgcggccggctcaacaatccgaaattcgtcgaaagcgcgccggatgacgtggtcgag
gaggcccgcgagaacctgcgcgcgcgggaagaggaagaggccaagatccgcgccgcgctc
gaccggctggccgagttgggctga
DBGET
integrated database retrieval system
