Roseovarius indicus: RIdsm_03718
Help
Entry
RIdsm_03718 CDS
T06222
Symbol
lcfB_12
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rid
Roseovarius indicus
Pathway
rid00061
Fatty acid biosynthesis
rid00071
Fatty acid degradation
rid01100
Metabolic pathways
rid01212
Fatty acid metabolism
rid02024
Quorum sensing
rid04146
Peroxisome
Module
rid_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RIdsm_03718 (lcfB_12)
00071 Fatty acid degradation
RIdsm_03718 (lcfB_12)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIdsm_03718 (lcfB_12)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_03718 (lcfB_12)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rid01004
]
RIdsm_03718 (lcfB_12)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rid04147
]
RIdsm_03718 (lcfB_12)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RIdsm_03718 (lcfB_12)
Lipid biosynthesis proteins [BR:
rid01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RIdsm_03718 (lcfB_12)
Exosome [BR:
rid04147
]
Exosomal proteins
Exosomal proteins of breast milk
RIdsm_03718 (lcfB_12)
Exosomal proteins of breast cancer cells
RIdsm_03718 (lcfB_12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QEW27896
UniProt:
A0A0T5P345
LinkDB
All DBs
Position
complement(3824399..3825922)
Genome browser
AA seq
507 aa
AA seq
DB search
MNIGLWLMRTAQARGGETAIFKGAEPVTDYAGFHERAARLAGWLAEQGIGPGDRVGIFMK
NCPEFLFAFYGVWYAGAAVVPINAKLHGREAAWILGHSGAKMCFATPGLAEALGEAGVEA
EVVDTTGAGFAGAMTAAPVEAPAPRAQDDLAWLFYTSGTTGRPKGVIITHRMLAAMSLTY
LASVDPVTPQDATLYAAPMSHGAGLYTPVHVLMGARHVCPVSGGFEPGEIFELAKTVGNL
HLFAAPTMIKRMTQAAKAQGVRGEGLRSIVYGGGPMYVADIVEATEVFGPVFLQIYGQGE
APMGITSLTRAEVADRTHPRWRERLGSVGRAQAGVEVMIGDEEGNPCAVGEPGEIMARGD
VVMPGYWENPEGTAKTLKDGWLMTGDVGTMDADGYVTLQDRSKDVIISGGTNIYPREVEE
CLLMHGSVSEVSVVGRPDPEWGEDVVAFVVCDGALDEAALDAHCRENIARFKRPKAYVAV
PELPKNNYGKVLKTELRKMLEEETAND
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggtctgtggctgatgcggacggcgcaggcgcgcgggggggaaacggccatt
ttcaagggggccgaaccggtgacggattacgccggcttccacgagcgcgcggcgcggctg
gccgggtggttggccgaacagggcatcgggccgggcgaccgggtcgggatcttcatgaag
aactgccccgagtttttgtttgcgttctatggcgtctggtatgccggggcggcggtggtt
ccgatcaacgccaagctgcacgggcgcgaggcggcgtggatccttggccattcgggggcg
aagatgtgctttgccacgcccggcctggccgaggcgctgggcgaggccggggtcgaggca
gaggtggtcgacaccaccggtgcgggctttgccggggcgatgacggccgcgccggtcgag
gcgccggcgccgcgggcgcaggacgatctggcgtggcttttctatacatccggcaccacg
gggcggcccaagggggtgatcatcactcaccgtatgctggccgccatgtcgctgacctat
ctggccagcgtcgacccggtgacgccgcaggatgccacgctttacgccgctccgatgagc
catggagccgggctctacactcccgtgcatgtgctgatgggcgcgcggcacgtctgcccc
gtctcgggcgggttcgagccgggtgagattttcgagctggcgaagaccgttggcaacctg
cacctgttcgccgcgccgacgatgatcaagcggatgacgcaggcggcgaaggcgcaaggc
gtcaggggcgaggggctgcgcagcatcgtctatggtggcgggcccatgtacgtggccgat
atcgtcgaggcgacggaggtgttcggcccggtcttcctgcagatctacgggcagggcgag
gcgccgatggggataacctcgctgacaagggccgaggtggccgaccgcacgcatccgcgc
tggcgggaaaggctggggtcggtcgggcgcgcgcaggcgggcgtcgaggtgatgatcggc
gatgaggaggggaacccctgtgccgtgggcgagcccggcgagatcatggcgcgcggcgac
gtggtgatgccgggctactgggagaacccggaaggcacggccaagacgctgaaggacggc
tggctgatgaccggcgacgtgggcacgatggatgcggacgggtacgtgacgctgcaggat
cgctcgaaggatgtcatcatctcggggggcaccaatatctacccccgcgaggtggaggaa
tgcctgctgatgcacggatcggtcagcgaggtctcggtggtgggccggcccgacccggaa
tggggggaggacgtggttgccttcgtggtttgcgacggtgcgttggacgaggcggcgctc
gatgcgcattgccgcgagaatatcgcgcggttcaagcggcccaaggcctatgtcgccgtg
ccggagctgccgaagaacaattacggcaaggtgctgaagaccgagttgcggaagatgctg
gaggaggagacggcaaatgactga
DBGET
integrated database retrieval system
