Roseovarius indicus: RIdsm_03849
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Entry
RIdsm_03849 CDS
T06222
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rid
Roseovarius indicus
Pathway
rid00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RIdsm_03849 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rid01007
]
RIdsm_03849 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rid03016
]
RIdsm_03849 (aspS)
03029 Mitochondrial biogenesis [BR:
rid03029
]
RIdsm_03849 (aspS)
Enzymes [BR:
rid01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RIdsm_03849 (aspS)
Amino acid related enzymes [BR:
rid01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RIdsm_03849 (aspS)
Transfer RNA biogenesis [BR:
rid03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RIdsm_03849 (aspS)
Prokaryotic type
Other AARSs
RIdsm_03849 (aspS)
Mitochondrial biogenesis [BR:
rid03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RIdsm_03849 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QEW28024
UniProt:
A0A0T5P4F3
LinkDB
All DBs
Position
complement(3948235..3950016)
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AA seq
593 aa
AA seq
DB search
MHAYRSHTCAELTKSNVGETVRLSGWVNRIRDHGGVLFIDLRDHYGMTQVLCDPDSAVFS
QVEKVRSEWCIRIDGEVKARDESLINPRITTGEIEVYIRDIEVLGASAELPLIVFGDQEY
PEETRLRYRYLDLRREAMQRNMTLRSDVVASFRRRMWDKNFREFQTPIITASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME
MSFVTQQDIFDTISPVIAGVFEEHGQGAKVDDPASWPQIPYKEAALKYGTDKPDLRNPIE
MQDVSEHFRGSGFAIFAKLLEQDGTEIRAIPAPTGGSRKFCDRMNSFAQKEGLPGMGYIF
WRDQGEGMEAAGPLAKNIGPERTEAIREQLGLGVGDAAFFLGGKPSAFERVAGKARDVIG
EELNLTEQNRFAFAWIVDFPIYEKDEENGAIDFEHNPFSMPQGGMEALEGDPLAVKGYQY
DLACNGYEIVSGAIRNHKPEIMFKAFELAGYDEAEVRKRFGALVNAFQYGAPPHGGCAAG
IDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSEPTSDQLMELGLRVIPQE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatatcgcagccacacctgcgcagaactgaccaagtcgaacgtgggcgagacc
gtccgcctgtcgggctgggtgaaccgcatccgcgaccatggcggcgttctgttcatcgac
ctgcgcgaccattacggcatgacgcaggtgctgtgcgaccccgacagcgcggtgttctcg
caggtcgagaaggtccgctcggaatggtgcatccgcatcgacggcgaggtgaaggcgcgc
gacgagagcctgatcaacccccgcatcaccaccggcgagatcgaggtctacatccgcgat
atcgaggtgctgggcgcctcggccgaactgccgctcatcgtcttcggcgaccaggaatac
cccgaggaaacccgcctgcgctatcgctacctcgacctgcgccgcgaggcgatgcagcgc
aacatgacgctccgctccgacgtggtggcctccttccgccgccgcatgtgggataagaat
ttccgcgagttccagacgccgatcatcaccgcgtcctcgcccgagggcgcgcgcgacttc
ctggtgccctcgcgcctgcacccggggaaattctacgccctgccgcaggccccgcagcaa
ttcaagcagctgatcatgatgtcgggcttcgacaagtacttccagatcgccccctgcttc
cgcgacgaagacccgcgcgccgaccgctcgccgaccgacttctaccagctcgacatggaa
atgagcttcgtcacccagcaggacattttcgacaccatctcgcccgtcatcgcgggcgta
ttcgaggaacatgggcaaggcgccaaggtcgacgacccggcaagctggccgcagatcccc
tacaaggaagcggcgctcaaatacggcaccgacaaacccgacctgcgcaacccgatcgag
atgcaggacgtctccgaacatttccgcggctcgggcttcgcgatcttcgccaagctcttg
gaacaggacggcaccgagatccgcgccatcccggcgcccacgggcggcagccgcaagttc
tgcgaccggatgaacagcttcgcccagaaagagggcctgccggggatgggctatatcttc
tggcgcgaccagggcgaggggatggaagcggccggcccgctggccaagaatatcgggccc
gagcgcaccgaggcgatccgcgaacagctaggcctcggcgtgggcgacgcggccttcttc
ctcggcggcaagccttccgccttcgaacgcgtggcaggcaaggcccgtgacgtcatcggc
gaggaactgaacctcaccgaacagaaccgcttcgcctttgcctggatcgtcgacttcccg
atctacgagaaggacgaggagaacggcgccatcgacttcgagcacaaccccttttcgatg
ccgcagggcgggatggaggcgctcgagggcgacccgctcgccgtcaagggctaccagtac
gacctcgcctgcaacggctacgagatcgtctcgggcgccatccggaaccacaagccggaa
atcatgttcaaggccttcgaactggccggctatgacgaggccgaggtgcgcaaacgcttc
ggcgccctcgtcaacgccttccagtacggcgcacccccgcacggcggctgcgcggcgggc
atcgaccgcatcgtcatgctgctggccggcacctcgaacatccgcgaggtcatcatgttc
ccgatgaaccagcgcgccgaggacctgatgatgaacgcaccgtcagagccgaccagcgat
cagctgatggagctgggcctgcgggtgatcccgcaggaatag
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