Roseovarius indicus: RIdsm_03866
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Entry
RIdsm_03866 CDS
T06222
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rid
Roseovarius indicus
Pathway
rid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RIdsm_03866 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rid03021
]
RIdsm_03866 (rpoA)
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_03866 (rpoA)
Enzymes [BR:
rid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RIdsm_03866 (rpoA)
Transcription machinery [BR:
rid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RIdsm_03866 (rpoA)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RIdsm_03866 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QEW28041
UniProt:
A0A0T5P4H4
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All DBs
Position
complement(3970951..3971967)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPLRQATVVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMEVEGPKRLSISAKGPGVVTAGDITD
SAGIEILNKDHVICHLDEGADLFMELTVNQGKGYVAADKNKPEDAPIGLIPVDAIYSPVV
KVSYDVQPTREGQVLDYDKLTMKVDTDGSVTPDDAVAYAARILQDQLSIFVNFEEPESAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggcagaactgatcaagccgacgcagctggatgtgaagccgggc
aacgacccgctgcgtcaggccaccgtcgtggccgaaccgctggaacgcggcttcggtctg
accctcggcaacgcgctgcgccgcgtgctgctgtcgtcgcttcagggcgccgcgatcacc
tcggtgcagatcgacaacgtgctgcacgagttctcgtcggttgccggtgtgcgcgaagac
gtgacagacatcgtcctgaacctcaagggcgttgccctgcggatggaagtggaagggccc
aagcgcctgtcgatctcggccaaggggccgggcgtcgtcactgccggtgacatcaccgac
agcgcgggcatcgagatcctgaacaaggatcacgtgatctgccacctcgacgagggcgcc
gacctgttcatggaactgaccgtgaaccagggcaagggctatgtcgccgccgacaagaac
aagccggaagatgcgccgatcggcctgatcccggtcgacgcgatctattcgccggtcgtc
aaggtcagctacgacgtgcagccgacccgcgaaggccaggtgctggactatgacaagctg
accatgaaggtcgacaccgacggctccgtcacgccggacgacgcggtggcctatgccgcc
cgcatcctgcaggaccagctgtcgatcttcgtcaacttcgaagagcccgaatccgccggc
cgccaggacgaggacgacgggctggagttcaacccgctgcttctcaagaaggtcgacgag
ttggagctttcggtgcgctcggcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaaaaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctttccggcatgggtctgcacctcggcatggatgtcgag
gactggccgccggacaacatcgaggatctggcgaagaaattcgaagatcagttttaa
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